Hydrogenobacter thermophilus: Hydth_1850
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Entry
Hydth_1850 CDS
T02106
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hte
Hydrogenobacter thermophilus
Pathway
hte03030
DNA replication
hte03430
Mismatch repair
hte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hydth_1850
03430 Mismatch repair
Hydth_1850
03440 Homologous recombination
Hydth_1850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hte03032
]
Hydth_1850
03400 DNA repair and recombination proteins [BR:
hte03400
]
Hydth_1850
Enzymes [BR:
hte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hydth_1850
DNA replication proteins [BR:
hte03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Hydth_1850
DNA repair and recombination proteins [BR:
hte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Hydth_1850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
POT1
HHH_3
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
ADO46231
LinkDB
All DBs
Position
1698585..1702061
Genome browser
AA seq
1158 aa
AA seq
DB search
MLTMAEFVHLHLHTQYSLLDGAIKIKDLAKKARELGYKAVAITDHGNLFGILEFYRSMKK
EGIKPIIGMEAYFTTGSRHDRKGKASEDNITDRYNHHLILIAMNDTGLKNLMQLSSISYQ
EGFYYKPRIDYEVLSQHCEGLIAITACLKGVPTHYASLGDEEKATHWVKKFKDLFGENLY
LELQSNQLPEQEIANRILINIAKKMGVKLIATNDSHYLNPDDRLAHQVLMAVQMKKTLME
IKQESAIKCSNEGLHFAGPEEVWEKFKGKFEGWEEALKNTLEVAEKVQDSFELLENRGYL
FPKYDTEDKTTAEFLRHLAVKGLRQRIQQGLAKDSPEYWNRLEYELEVVFRMGFEGYFLI
VQDFINWAKSQSIPVGPGRGSAAGSLLAFSLGITDIDPIKHGLLFERFLNPERISMPDID
VDFCMEKRDKVIEYVKSKYGEENVAQIITYNVMKAKQTLRDVARALGVPYSVADSLAKLI
PQGDVQGTWLSLEEMYLVPIKELLDKYGHHRRDIEDHVSKFRKMCSENPEIKTLVEIALK
LEGLTRHTSLHAAGVVISPLPLRERIPLYYDKDQVLATQFDMVNLEELGLIKMDFLGLKT
LTELERMKQLVEERHKVSINYLSLPLDDPLVYELLRKGNTTGVFQLESVGMKNLLKRLEP
DSFDDIVAVLALYRPGPLKSGLVDSYINRKHGKEQVDYIFPELEPVLKDTYGIIVYQEQV
MKISQVLAGFTPGQADTLRKAIGKKKKEVMQEMKEKFIRGALERGYNQEKVIKLWNDIEE
FASYSFNKSHSVAYGYISYWTAYMKAHYPEEFFVVKLSTEKSDKKFINLIKDAKSFGFEI
LQPDINESHVDFTIESKGKIRFGLARIKGVGEDTARSIVEARNGRWKGLGDFLKSIDQRK
VNKRVLEALIKAGAFDFTGESREKLLSYMDKASKGGVLPLGDLFGTKVEQKVDPLKYEKE
VLGIYISKHPVDPFEKLLSGKVKWLEELEELQEGTYNFVGVVSDLKVKKTKNGTYMATFN
LIDKTGIGHAVAFPDVYEKNKELIKEDALLVLKCLVEWDEELEETKLIVKEVYKPEDFIK
GEGMNVVLVFTKELSDDELLHVKNCLMEHVEQAEGKEVIMDLRINGYRTVLQADPQIKVV
PSAELIESLQKFGIRLIV
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccatggcggagtttgtgcatctgcaccttcatacccaatactctcttcttgat
ggagctattaagataaaggacctggcaaagaaagccagagagctgggatacaaggctgta
gctataacggatcacggaaatctctttggtatccttgagttttacagaagtatgaagaag
gaaggcataaagcctataattggcatggaagcttactttacaacaggttcgcgccacgac
agaaaggggaaagcgtcagaagacaacatcacagacaggtacaaccatcaccttattctg
attgccatgaacgatacaggactcaaaaaccttatgcagttatcaagcatatcttaccaa
gagggtttttattacaagccaagaatagactacgaggttttgagccaacactgtgagggt
cttattgccataaccgcatgcctcaaaggcgtgcctactcattatgcctccttgggtgat
gaggaaaaggctactcattgggtcaagaagttcaaagacctctttggagaaaacctttac
ttagagcttcagtccaaccaactgcccgagcaggagatagccaacaggatactcataaac
attgctaaaaaaatgggtgttaaacttattgccaccaacgactctcattaccttaacccc
gacgacagacttgcccatcaggtgcttatggcggtgcagatgaaaaagaccctcatggaa
atcaagcaggagagcgctataaagtgttccaacgaagggcttcattttgctggtcctgag
gaagtttgggagaagtttaaaggcaagtttgaaggctgggaggaggcgctaaaaaatact
cttgaggtagcggagaaggtacaggacagctttgagcttttggaaaacagaggttatctc
tttcccaaatacgatacggaagataaaaccactgcagagtttttaaggcatctggcggta
aagggtctcaggcagagaatacagcaggggcttgcaaaggacagtcccgagtactggaat
aggttggagtatgagcttgaagtggtttttaggatgggctttgaaggatacttcctcata
gtgcaggactttataaactgggcaaagtctcagagtatccccgttggacccggaagaggc
tcagctgcaggatcgcttctcgccttttcattgggtataaccgacattgatcccataaag
cacgggcttttgtttgaaaggttcttaaatcccgaaagaatatccatgccggacatagat
gtggacttttgtatggaaaaaagagacaaggttatagagtatgtaaagtccaagtatgga
gaggagaatgtagctcagattatcacatacaatgttatgaaggcaaagcagacccttaga
gatgtagcgagagctctgggagtgccttactcggtggctgacagccttgccaagctcata
ccgcaaggcgatgttcagggcacatggctttcccttgaggaaatgtatctggtacctata
aaagaactccttgataagtatgggcatcacagaagggacatagaggaccatgtaagcaag
ttcaggaaaatgtgttcagaaaatccggagataaaaacgcttgtggagatagctttaaag
ctggaaggtctcacaagacatacatcactgcacgcagcaggtgttgttatatctcctttg
ccccttcgtgagcgtatacctctttattacgataaagaccaagttcttgccacccagttt
gatatggtcaatttggaggagcttggactcataaagatggactttctggggcttaagact
ctcacagagcttgaaagaatgaaacagttagtagaggagaggcacaaagtcagtataaat
tacctgagcctaccacttgatgatcctctggtttatgagcttctcaggaagggcaacacc
accggagttttccaacttgaaagcgtaggcatgaaaaatcttttaaaaagactggagcca
gacagctttgacgacatagtggctgttcttgccctctacagaccgggacctctaaaaagc
ggtcttgtggacagctacataaacagaaagcacggaaaggagcaggtagattacatcttc
ccagagcttgagccagtcttgaaggatacttacggcatcatagtttatcaggagcaggtt
atgaaaatctctcaggtgcttgcaggcttcactccgggtcaagcagacactctccgtaaa
gcaataggcaagaagaagaaggaagttatgcaggaaatgaaggagaagtttatcaggggg
gcgctggaaagaggttataaccaagaaaaggtgataaaactctggaatgacattgaggag
tttgccagctactctttcaacaaatctcactcagttgcttacggctacatatcctattgg
acagcttatatgaaggcacactatccggaagagttttttgtggtaaaactctccacagaa
aagagcgacaagaagtttataaatctcataaaggatgccaaaagttttggttttgaaata
ctccagccggacataaacgagagtcatgtggactttaccatagagtcaaagggcaaaatt
aggtttggattggcaaggataaagggggtaggagaggatacagccaggtccatagtggaa
gcaagaaatggaagatggaaaggcttaggggactttttaaaaagcatagatcagaggaag
gtaaacaagagggtgcttgaggcgcttataaaagcaggcgcttttgactttactggagag
agcagagaaaaacttctttcttacatggataaagcttcaaaaggaggagttttacctttg
ggagacctctttggtacaaaggtagagcaaaaagtggacccactaaagtacgagaaggaa
gttcttggcatatatatttccaagcatccggtggatccttttgaaaaactcctatcagga
aaagtaaagtggcttgaagagcttgaggagttgcaggaaggcacctacaattttgtgggc
gttgtgtccgaccttaaggttaaaaagacaaagaatggcacctacatggcaacctttaac
ctcatagacaaaaccggcataggtcacgctgtagctttccccgatgtttatgagaaaaac
aaggagcttataaaggaagatgctcttttggttcttaagtgccttgttgaatgggacgag
gaattagaggagactaaactgatagttaaagaagtatacaagccagaagactttataaaa
ggagaaggcatgaatgttgtgttggtatttactaaagagctttccgatgatgagcttctg
catgtaaaaaactgcctcatggagcatgtggaacaggcagaaggtaaggaggtcataatg
gacctgcgtataaacggatatagaactgtgttgcaggcagacccacaaataaaagtggtc
ccaagtgctgaacttatagaaagcctacagaagttcggcatcagactgatagtttag
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