Hydrogenobacter thermophilus: HTH_0315
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Entry
HTH_0315 CDS
T01167
Symbol
radA
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
hth
Hydrogenobacter thermophilus
Brite
KEGG Orthology (KO) [BR:
hth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hth03400
]
HTH_0315 (radA)
DNA repair and recombination proteins [BR:
hth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HTH_0315 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
DnaB_C
AAA_22
ChlI
ABC_tran
AAA_16
AAA
AAA_24
Lon_C
RecA
nSTAND3
NTPase_1
NACHT
HypA
AAA_5
DUF7129
zf-RING_10
GvpD_P-loop
AAA_19
RsgA_GTPase
AAA_30
NB-ARC
SLFN-g3_helicase
AAA_14
NPHP3_N
DAP3
AAA_29
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
BAI68782
UniProt:
D3DG30
LinkDB
All DBs
Position
319789..321117
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AA seq
442 aa
AA seq
DB search
MKRERTQFVCQECGYSSAKWLGKCPSCGNWNSFVEESEHVLIKSYREKPSVRSICEWEHE
GLERKSVGFENFDRAIGGGMVPGQVMLLAGEPGIGKSTLLLQVSDRYAQNYGSVLYVSGE
ESGSQIAVRGRRTGVKSKDVLVLPETRLEAVLDVAQELNPQLLVVDSIQTLYTESLSSSP
GSVSQVRECAFRITEFCKSRDIPVFLVGQITKEGDIAGPKVLEHLVDTVLYFEGERFNFY
RIVKVVKNRFGSSGEVAVFRMLDRGLEEVPEPSAFFLQERTQSCGSVVFPYTEGSKPVLV
EVQALTIQALYTTPQRRSQGYDVNRLSIILAVLEKECKIFTRDRDVFVNVVGGMQIREPA
ADLAVALAIISSIKNKPIPDIVAFGEIGLSGELRAVHFADVRLKEAARFGFSRAFLPKSI
SIPVEGMEVVGIAHLRDALEIL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagaaagaacccagtttgtatgtcaggagtgtggatactcctcagccaagtgg
cttggtaaatgtccctcttgcggaaattggaactcctttgtggaggagagcgagcatgtg
ctaataaagagctatagagagaaaccctctgtgaggtctatatgtgagtgggagcatgaa
ggtctggagaggaagagtgtaggttttgaaaactttgatagggcaattggtggaggtatg
gttccgggtcaggtaatgcttctggctggggagccaggtataggcaaatccactctgttg
cttcaggtatccgacaggtatgctcaaaattacggaagtgtactttatgtatctggggaa
gagtctggctctcagatagctgtaagagggaggaggacgggtgttaagagcaaagatgtg
ctggtgcttccagagacaagactggaggctgtccttgatgtagcgcaagaattaaacccc
cagctattagttgtggattctatccagaccctctatacggaaagtctctcttcatctcca
gggtctgtgtctcaggtaagggagtgtgcctttaggataactgagttttgcaaatcaaga
gatattcccgtttttctggtcggacagataacaaaggagggcgacatagcaggacctaag
gtgctggaacacttggtggatacggtactttactttgaaggtgagcgcttcaatttttac
aggatagtgaaagtggtaaaaaataggtttggctcctcgggggaagtggcggtttttagg
atgctggacagaggtttagaggaggttccagagccttcagccttctttcttcaggagagg
acccaaagctgtggaagtgtggtatttccttatacagaaggtagcaagccagtactggtg
gaggttcaggctcttaccatacaagccctttacacaacacctcaaagaaggtcgcaaggt
tacgatgtgaacagattatccataatacttgctgtgcttgaaaaggagtgcaagatattt
accagggatagggatgtttttgtaaatgtggtgggtggcatgcagataagagagcccgca
gcagaccttgcagttgcccttgccataatctcatccataaagaacaaaccaatacccgac
atcgtagcctttggagaaataggtttatctggcgaactgagggcggttcactttgcggat
gttagattaaaagaggcagccagatttggctttagccgtgccttcttgcccaaatccata
agtattcctgtggaagggatggaggttgttgggatagctcatctaagagatgccttggaa
attctgtaa
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