Hydrogenobacter thermophilus: HTH_0346
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Entry
HTH_0346 CDS
T01167
Name
(GenBank) sigma 54 specific transcriptional regulator, Fis family
Organism
hth
Hydrogenobacter thermophilus
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS_4
PAS_9
PAS_8
PAS
AAA_5
Mg_chelatase
Diguanyl_cycl_sensor
AAA
AAA_16
MCM
AAA_7
AAA_2
AAA_22
GATase_7
nSTAND3
HTH_30
NtdA_N
ABC_tran
DUF87
Motif
Other DBs
NCBI-ProteinID:
BAI68812
UniProt:
D3DG60
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Position
complement(350012..351568)
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AA seq
518 aa
AA seq
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MDFNILEHLFDAVLVIDKDRRVIYANSSAKGLIGDAKEGESCKGLFSICSHCPMSYVEEE
REGLQVYDARIRNGKHVCWSMTPLFEKGDFVGVIEVFRDVSNVVSCILEAERQKAYKEAI
FNSIVEAILVLDTQGYVVEHNQIAKRMLCREEEENLTGKYIKELVNLDLEELPPEGERAD
VYINTPCGKQKASVLLSPMQSGFGYIVSLYVVNEVAVCGFGEEMIITKSSAFQKVIDLAR
ACAEHDVNVLIEGETGTGKSLLAKYIHNLSPRRAGPFVKINCAAIPDHLLEAELFGYMRG
AFTGAVRDKPGKVELAEGGTLFLDEIGDMPLHLQAKILHLVQEKEFERLGDTKVRRANVR
IISSTNKNLRELIKKGLFREDLYYRLGVVKLQVPPLRERKEDIPLLINHFLEKYSKAYSR
KIKGVSSEAMKLLLSYHFPGNVRELENVIERAIITCKGSVINVEDLQLEFQEQVPQKEED
REKIRQVLEQTGWNKSLAAKVLGMHRTTLWRKMKELGL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggactttaatatccttgaacatctctttgacgcagtccttgtaatagacaaggatcgc
agggtcatttatgccaacagttcagctaaagggcttataggagatgccaaggaaggtgag
agctgtaaaggattgtttagcatatgctctcactgtcctatgagttatgtggaggaggag
agggaggggcttcaggtttacgatgctcggataaggaacggaaaacatgtgtgctggagc
atgacacccctctttgaaaaaggtgattttgtaggtgtgattgaagtttttagggatgtc
agcaatgtggtgtcctgcatattggaggcagaaaggcagaaagcttacaaagaggctatt
tttaactccatagtggaagccatactggtgctggatacccaaggttatgtggtggaacac
aatcagatagccaaaaggatgctttgcagagaggaggaagaaaacttaactggcaaatac
ataaaggagttggtaaatttagacttagaagagttgcctccggagggtgagagggcggat
gtttacataaacacaccgtgtggaaagcagaaggcatctgtgcttttgtcccctatgcag
tcgggttttggttatatagtgtctttgtatgtggtcaacgaagtagctgtatgcggcttt
ggtgaggaaatgatcatcacaaaaagttcggcttttcagaaggttatagaccttgccaga
gcttgcgcggaacacgatgttaatgtgcttatagagggcgagacaggcacgggcaaaagc
cttcttgccaaatacattcacaacctctctcccagaagagccggtccctttgtcaaaatc
aactgtgctgccattccagaccatcttctggaagctgagctttttggatatatgagaggt
gcctttacgggagcggtaagggacaagccgggaaaggtggagcttgcggagggtggaaca
ctctttctggacgaaataggggacatgccccttcatcttcaggcaaagatacttcatctt
gtgcaagaaaaagagtttgaaagacttggagacaccaaggttagaagagccaatgttaga
ataatatcctccaccaacaaaaacttgagagagcttataaagaagggacttttcagagag
gacctttattacagacttggcgtagtcaagctccaagttccacctctgagggagagaaaa
gaggatatacctcttttgataaaccactttttagaaaagtactcaaaggcttactcaagg
aagataaaaggagtttcatcagaagctatgaaattgctcctctcttatcactttccgggg
aatgttagagaacttgagaatgtaatagagagggccatcatcacctgcaaagggagcgtt
ataaatgtagaagaccttcagctggagtttcaagaacaagttcctcaaaaggaggaagac
agagaaaagataaggcaagtgctggagcagacaggctggaacaaaagcttggcggcaaaa
gtccttggcatgcacagaaccaccctctggagaaagatgaaggaactggggttataa
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