Hydrogenobacter thermophilus: HTH_0805
Help
Entry
HTH_0805 CDS
T01167
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hth
Hydrogenobacter thermophilus
Pathway
hth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HTH_0805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hth03019
]
HTH_0805
03009 Ribosome biogenesis [BR:
hth03009
]
HTH_0805
Enzymes [BR:
hth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HTH_0805
Messenger RNA biogenesis [BR:
hth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HTH_0805
Ribosome biogenesis [BR:
hth03009
]
Prokaryotic type
rRNA helicases
HTH_0805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
HEM4
AAA_30
Flavi_DEAD
PRAI
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
BAI69265
UniProt:
D3DHG3
LinkDB
All DBs
Position
complement(743566..744663)
Genome browser
AA seq
365 aa
AA seq
DB search
MEFNFQQLSEILQKAIRDLGYEEPTPIQKEAIPLALKGYDIMGQAATGTGKTAAFGIPIV
EKISKDDGLKALVLTPTRELALQVKEQLYALSKYKALKVFVFYGGTPVRRDLELLSKVVP
NIVIGTPGRIKDLLSRGVLNLGGVSFLVLDEADLMLDMGFVEDIESIIAYTPKDRQTFLF
SATIPKEIELLARKHLKDDYKFVRVISAELKPKIEERLIRLNSSKQKISELERILREHLL
EKVIIFVRTKKDARDISQELKNRGFSVVSLHGDMTQRQRENALKLFREGKVKTVVATDVA
SRGLDIKGVSLVINYQIPEDPEVYIHRIGRTGRVGSYGKAYSLITPEDSKALWRIKKVKE
RYTGV
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaattttcaacagcttagtgaaatacttcagaaggcaataagggatctgggt
tatgaggaacccacacccatacagaaggaagctatacctttagctttgaaaggttatgac
attatgggtcaggcggcaacgggaacggggaaaactgctgcctttggcattcccatagta
gagaagataagcaaagatgacggcttaaaggctctggttcttacacctacccgtgagctt
gcccttcaggttaaagaacagctctatgccctatccaagtacaaagctcttaaggtgttt
gtcttttacggaggaacacctgtaaggagagaccttgaacttctatccaaggttgtacct
aacatagtcataggcacgcctggcaggataaaggacctcctaagtaggggggtgctaaac
cttggtggtgtttcctttcttgtccttgatgaagcggaccttatgcttgacatgggcttt
gtggaggacatagagagcataatagcctatacaccaaaagacagacagacctttctcttt
tccgcgaccataccaaaggagatagaactgcttgcaagaaagcacttaaaagatgactac
aaattcgtaagggtaatatctgcagagctaaagccaaagatagaggagaggctcataagg
cttaactcatccaagcaaaagatatccgagcttgagaggatactcagagaacatcttctg
gaaaaagttattatttttgtgagaaccaagaaggatgcacgagatatatctcaggaactc
aaaaacagaggctttagcgtagtgtctttgcacggagatatgacccaaaggcagagagaa
aacgctctcaagcttttcagagagggtaaagtgaaaacggtggttgctacggatgtagcc
tcaagaggtcttgacataaagggtgtaagtctggtgattaactatcagatacccgaagac
cctgaggtttatatacacagaataggaagaacgggaagagtaggaagttatggcaaagca
tacagcctcataacacccgaagacagcaaagccctttggaggataaagaaggtaaaggaa
agatatactggggtttaa
DBGET
integrated database retrieval system
