KEGG   Hydrogenobacter thermophilus: HTH_1251
Entry
HTH_1251          CDS       T01167                                 
Symbol
cas6
Name
(GenBank) CRISPR-associated protein
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
hth  Hydrogenobacter thermophilus
Brite
KEGG Orthology (KO) [BR:hth00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hth02048]
    HTH_1251 (cas6)
Prokaryotic defense system [BR:hth02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    HTH_1251 (cas6)
   Subtype I-D factors
    HTH_1251 (cas6)
SSDB
Motif
Pfam: Cas_Cas6_C Cas6_I-A
Other DBs
NCBI-ProteinID: BAI69705
UniProt: D3DIQ3
LinkDB
Position
complement(1132471..1133208)
AA seq 245 aa
MILKIKLTGEGLIRLPKSYNHLLQAFFYKNTDPVLSKFLHEIGFVYNRRRFKLFTFSKII
GKLASRQGNLVFFEPQITVYFASPLMDIVSSAVNVFLKRENLFLGENRLRLESVELIKPT
VREDVNVRCLSPITVYRTPEGETKKQFFSPWQEEFYELIKNNLIKKYQLIYGKSYKEELE
LKPLRISQRYKKKIVYKGSLIEAWEGYYNIRGSTQIVKLALEAGLGAKNPQGFGMVEVVD
SVEGD
NT seq 738 nt   +upstreamnt  +downstreamnt
atgatactaaaaattaaactgacaggtgaggggcttataagacttcccaagagctacaac
catctgcttcaggcttttttctacaaaaacacggacccagtgctctctaaattcctccac
gagataggctttgtttacaacagaaggaggtttaaactatttaccttttcaaagatcata
ggcaaattggcttccagacagggcaatctcgttttcttcgagccacagataacggtttac
tttgcctcacctttgatggatatagtatcttccgcggtgaatgttttcctaaagcgggaa
aatttattcctcggtgaaaacagattaagactggagtctgtagagcttattaaaccaact
gtgcgggaagatgtaaatgtcagatgtctatcacccataacggtttatcgcactccagaa
ggtgaaactaaaaagcagttttttagtccatggcaagaggagttttacgagcttatcaag
aacaatttgataaaaaaataccaacttatctacggcaagagctataaggaagagctggag
ctaaaacccctcaggataagtcaaagatacaagaaaaagatagtttataaaggatcactg
atagaagcgtgggaaggttattataatataaggggtagcactcagatagtaaagttagcc
ttagaggcgggtcttggggcaaagaatcctcagggctttggcatggtggaggtagtggac
agtgttgaaggcgattag

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