Hydrogenobacter thermophilus: HTH_1460
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Entry
HTH_1460 CDS
T01167
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
hth
Hydrogenobacter thermophilus
Pathway
hth03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HTH_1460 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hth03400
]
HTH_1460 (uvrA)
DNA repair and recombination proteins [BR:
hth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HTH_1460 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HTH_1460 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
AAA_21
SMC_N
UvrA_DNA-bind
AAA_16
AAA_29
AAA_15
nSTAND1
nSTAND3
AAA_23
AAA_25
RsgA_GTPase
DnaJ_CXXCXGXG
BCA_ABC_TP_C
ATPase_2
NACHT
RNA12
Viral_helicase1
ComA
PhoH
Ncstrn_small
Motif
Other DBs
NCBI-ProteinID:
BAI69910
UniProt:
D3DJA8
LinkDB
All DBs
Position
1330651..1333497
Genome browser
AA seq
948 aa
AA seq
DB search
MYSSIIIRGAREHNLKDINLDIPKNKLVVITGPSGSGKSSLAFDTIYAEGQRRYVESLSS
YARQFLGIMEKPDVDIIEGLSPAIAIDQKTTSKNPRSTVGTVTEIYDYMRVLWANIGKPH
CPMCGRLLEGLSAHEMLEKIWERYQGKRISVLSPIVRGKKGEFKELLKELYMKGFSRVRV
DGEYRRIEEIPPLEKNRKHTIEVVIDRLTFELDERARLLSAIEKALELSKGLLVIEDVDA
KHEEVFSERLTCPDHGFSLQELSPRLFSFNSPYGACPTCKGLGVKWEVVTKLLVDEDEPA
VDAFRIAETSFFNYIRYTVINILRQMGYDPKIKYYALPESVKNLLLYGGEVKGYTFEGIV
KHLEKRFMEEDSEKIREEISEYIKEKPCPACKGSRLKDEALSVLVMGRNIWEVCNMPIDQ
AREFLLGLLKSLTGRDYLVAEKLVKEITDRLGFLIDVGLDYLDLARSASTLSGGEMQRIR
LATQIGSKLTGVLYVLDEPSIGLHPRDTHRLIKTLRHLRDLGNSVIVVEHDPETIMAADW
VIDMGPGAGKMGGNVVAQGTVEDIMNHPDSLTGAYLSGRLTINMPEVRRKPKDMWIRIVG
ARKHNLKNITAEIPLGLFVCITGVSGSGKSTLIYDILWNYARAVFYGGQAEKEGFDKIEG
LEHIDKVINVDQSPIGRTPRSNPATYTKLFDLIRDLFASTPEAKARGYTAGRFSFNVKGG
RCEACQGEGVIKVEMHFLPPVYITCDVCKGKRYNRETLDILFKGKNIADVLDMTVDEAYE
FFYHHTAIRRKLQLLKDVGLGYIKLGQPATTLSGGEAQRIKLARELSKKDTGRTLYLLDE
PTTGLHMDDVKKLIEVLQRLVDKGNTVVVIEHNLDVIKCADWIIDLGPEGGEKGGYVVAC
GPPEEVMENPSSYTGLYLKRYISETASKSSYTPTLPQGGTQQREQAHL
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtagcataataataagaggagcaagagagcataacctgaaggatataaatctt
gatatacctaaaaacaagcttgttgtcattacaggtccttctgggagtggtaagtcctct
cttgcctttgacaccatatacgccgaggggcagagaagatatgtagagtcgctttcttct
tacgcaaggcagtttttgggtattatggaaaagcccgatgtggatattatagagggtctt
tcccccgccatcgccatagaccaaaaaaccacatccaaaaacccccgatccacagtaggc
acagttacagaaatatacgactacatgagggtcctatgggcaaacataggtaaaccacac
tgtcctatgtgtggacggcttttagaagggctctccgctcacgagatgctggaaaagata
tgggaaaggtaccaaggaaagcgcataagcgttctctcgccaatagtcagaggcaaaaag
ggagagtttaaggagcttctaaaagagctttatatgaaaggcttttcaagggttagagtg
gatggagagtacagaaggatagaggaaatccctcctttggagaaaaacagaaaacacacc
atagaggtggttatagacagacttacgtttgagctggatgaaagggcaagacttttgagc
gctatagaaaaagccttagagctttcaaaaggtctcttggtgattgaagatgtggatgca
aagcacgaggaggtctttagcgaaaggctaacatgtccagatcacggtttttcccttcag
gagctttctccaaggctattctctttcaactctccttacggtgcttgtcccacctgtaaa
ggcttgggtgtaaagtgggaggtggttaccaaacttttggtggacgaggacgaacctgcg
gtggatgcctttaggatagcagaaacgagctttttcaattacattaggtataccgtaata
aacatacttcgccagatgggctatgacccaaaaatcaaatactatgcgctccctgagagt
gtaaaaaaccttctcctttacggaggtgaggtcaaaggttatacgtttgagggtatagtc
aagcaccttgaaaaacggtttatggaagaagattcagagaagataagggaggagataagc
gagtacataaaggaaaagccatgtcctgcatgcaaaggctcaaggctgaaggatgaggct
ctttcggtgttggtgatgggtagaaacatatgggaagtttgcaatatgcccatagatcaa
gcgagggagttccttttgggacttctcaagagcctaacaggaagggattacttggtggct
gaaaagcttgtaaaagaaataacagacaggctcggctttttgatagatgtagggcttgat
taccttgaccttgcaaggtcagcttctacactatcaggcggtgaaatgcaaagaataagg
cttgccacccagataggttccaagctcacaggcgtgctttatgtgttagacgagccttcc
ataggacttcatcccagggatactcacaggcttataaagaccttaagacatctcagagac
ttgggcaatagtgtaatcgtagttgaacacgaccctgaaactataatggccgcggattgg
gtgatagatatgggtccgggtgccggaaagatgggaggcaatgttgtggctcagggtact
gtagaggatattatgaaccatcctgattctcttacaggtgcttatctttctggaaggctc
accataaacatgccagaggtcagaagaaagccaaaagacatgtggataaggatagtgggt
gcgagaaagcataatctgaagaatatcaccgctgaaatacctttgggactttttgtgtgt
attacaggtgtttctgggagtggaaaatctacccttatatatgacattctttggaattac
gcaagagcagtgttttacgggggccaggcagaaaaagaaggctttgataagatagaggga
cttgaacacatagacaaagtgatcaatgtggaccaatcacccataggtaggactcccaga
agcaaccctgccacatatacaaaactttttgacctcataagggacctctttgccagcact
ccagaagcaaaggcaagaggatatactgcaggaaggttttccttcaatgtaaaaggagga
aggtgcgaggcgtgtcaaggagagggagtgataaaggtggagatgcattttcttccaccc
gtttatataacatgcgatgtgtgcaagggcaaaaggtacaacagagagacgctggacata
ctctttaagggcaagaacatagcagatgttttggatatgacggtagatgaagcttacgaa
tttttctatcaccacacagctataagaagaaagctccagctgcttaaagatgtaggattg
ggatacataaagcttgggcaacctgccactacgctttcgggtggagaagctcagaggata
aagctggcaagagagctatctaagaaggatacgggaagaaccctttaccttttggacgaa
cctaccaccggtcttcacatggatgatgtgaaaaaacttattgaggtccttcaaagactt
gtggataagggaaatacagtagttgttatagaacacaatttagatgtcataaagtgcgcc
gattggataatagaccttggaccggaaggtggagaaaagggaggatatgtggtagcctgc
ggtcctcctgaggaagttatggaaaacccctcttcttatacaggcttatatctcaaaagg
tatatctcagaaaccgccagcaagagctcatatactcctactcttccgcaaggtggtact
caacaaagggaacaagcacatctttaa
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