Hydrogenobacter thermophilus: HTH_1559
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Entry
HTH_1559 CDS
T01167
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hth
Hydrogenobacter thermophilus
Pathway
hth03030
DNA replication
hth03430
Mismatch repair
hth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HTH_1559
03430 Mismatch repair
HTH_1559
03440 Homologous recombination
HTH_1559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hth03032
]
HTH_1559
03400 DNA repair and recombination proteins [BR:
hth03400
]
HTH_1559
Enzymes [BR:
hth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HTH_1559
DNA replication proteins [BR:
hth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HTH_1559
DNA repair and recombination proteins [BR:
hth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HTH_1559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
TMEM40
Motif
Other DBs
NCBI-ProteinID:
BAI70008
UniProt:
D3DJK6
LinkDB
All DBs
Position
complement(1421943..1422593)
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AA seq
216 aa
AA seq
DB search
MFYYPDFLNRCIRHAYKNIHGEKFYACNWDVDIKAKIKDTTFVVCDTETTGLDLKKDEPI
AIGALKVKDLCIDLSQSFYRLIKPQTPPKRSSIEVHGITPSDLDIAKEREEVSKEFLEFS
RGSLLVGYFFYIDLVMLKKLLKSFCSVPFVPYSLDVLDLYKSEKHISLDEMLSLFDLPSS
SHHSALEDAYMTALVFLKLIKPYENRRLKDLPIKVW
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgttttactatccggactttttaaacaggtgtataaggcatgcttacaaaaatatacac
ggggaaaagttttatgcgtgtaattgggatgtggatatcaaggcaaagattaaagatacc
acctttgtagtatgcgatacggaaactactggacttgacctaaagaaggatgaacctata
gctataggagctttgaaagtaaaggacctatgcattgatcttagtcagagcttttatcgg
cttataaaaccccaaacaccacccaagaggtcatccatagaggtacacggcataactcca
tctgaccttgacattgccaaagagcgggaggaggtaagtaaagagtttttggagttttca
aggggaagtttgttggtaggctacttcttttacatagacctggtgatgcttaaaaaactc
ttaaagagcttctgtagtgttccctttgtcccttactctcttgatgtgcttgatctttac
aagagcgaaaagcacatctccttagacgagatgctctcactttttgaccttccttccagc
tctcatcactcggccttagaagacgcctacatgacggctcttgtcttccttaaactgata
aaaccttacgaaaacaggaggctaaaggacctacctataaaagtgtggtaa
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