Hydrogenobacter thermophilus: HTH_1856
Help
Entry
HTH_1856 CDS
T01167
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03086
RNA polymerase primary sigma factor
Organism
hth
Hydrogenobacter thermophilus
Pathway
hth02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hth00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HTH_1856 (rpoS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hth03021
]
HTH_1856 (rpoS)
Transcription machinery [BR:
hth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HTH_1856 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
BAI70300
UniProt:
D3DKE8
LinkDB
All DBs
Position
complement(1688195..1689127)
Genome browser
AA seq
310 aa
AA seq
DB search
MIPDTEQELINQYLKKVAKIPLLTPEEEKEVARRAKEGDQEAFRKLVESNLRFVINIAKQ
YLGYGLPLSELIAAGNHGLIEAAKRFDPDRGVKFISYAVWWIRQAIMQALSQQTGAVRIP
LKQAHVINRIGSIYSRLFRELEREPTPEEVAIEYSKEILSRELERELGRKPTKDEVEQRF
KKEGFKISPEEVEKCLQVCRIPLSLDAPVGENEDTFFVDFLSQHGTADVEERIINEVLEK
EIGDMLDRLPEKERRVIELRFGLRGEEPRTLREIGDILNISRERVRQLETRALRKLRNMA
MKRHLKDFLS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatacctgacacggaacaggagcttataaatcagtatcttaagaaggttgccaagata
cctctcctgacacccgaagaggaaaaggaggtagccagaagggctaaagagggtgatcag
gaagcctttagaaagctggtagaatctaacctaaggtttgttataaacatagctaagcag
tacttaggttatgggcttcccctctctgagcttatagccgcagggaatcacggtcttatt
gaagccgcaaagaggttcgatcccgataggggtgtaaagttcatatcctatgctgtatgg
tggataaggcaggctatcatgcaagcactctctcaacagacaggtgcggtaagaatccct
cttaaacaagcacatgttataaacaggataggtagcatatacagcaggcttttcagggag
ctggagagagagccaacgccagaagaggttgctatagaatattcaaaggaaatcttatcc
agggagcttgaaagggagcttgggaggaaacccacaaaagacgaggtggagcagagattc
aagaaggagggttttaaaataagcccagaagaggtggaaaagtgccttcaagtgtgccgc
attcctctatccttggatgcgccggtgggtgagaacgaggacacctttttcgttgacttt
ttgagccagcacggaactgcagatgtggaagagagaatcatcaacgaagtgcttgaaaaa
gagataggggacatgctggacaggttgccagagaaggagaggagagttatagagctccgt
tttggactccgaggtgaggagccaaggaccctcagggagattggagacatactcaacata
tccagagaaagggtaagacagctggaaacaagggctttgagaaaacttagaaacatggct
atgaaaagacatctcaaagactttctcagctga
DBGET
integrated database retrieval system
