Hydrogenobacter thermophilus: HTH_1868
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Entry
HTH_1868 CDS
T01167
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hth
Hydrogenobacter thermophilus
Pathway
hth03030
DNA replication
hth03430
Mismatch repair
hth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HTH_1868 (dnaE)
03430 Mismatch repair
HTH_1868 (dnaE)
03440 Homologous recombination
HTH_1868 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hth03032
]
HTH_1868 (dnaE)
03400 DNA repair and recombination proteins [BR:
hth03400
]
HTH_1868 (dnaE)
Enzymes [BR:
hth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HTH_1868 (dnaE)
DNA replication proteins [BR:
hth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HTH_1868 (dnaE)
DNA repair and recombination proteins [BR:
hth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HTH_1868 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
POT1
HHH_3
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
BAI70312
UniProt:
D3DKG0
LinkDB
All DBs
Position
1698736..1702203
Genome browser
AA seq
1155 aa
AA seq
DB search
MAEFVHLHLHTQYSLLDGAIKIKDLAKKARELGYKAVAITDHGNLFGILEFYRSMKKEGI
KPIIGMEAYFTTGSRHDRKGKASEDNITDRYNHHLILIAMNDTGLKNLMQLSSISYQEGF
YYKPRIDYEVLSQHCEGLIAITACLKGVPTHYASLGDEEKATHWVKKFKDLFGENLYLEL
QSNQLPEQEIANRILINIAKKMGVKLIATNDSHYLNPDDRLAHQVLMAVQMKKTLMEIKQ
ESAIKCSNEGLHFAGPEEVWEKFKGKFEGWEEALKNTLEVAEKVQDSFELLENRGYLFPK
YDTEDKTTAEFLRHLAVKGLRQRIQQGLAKDSPEYWNRLEYELEVVFRMGFEGYFLIVQD
FINWAKSQSIPVGPGRGSAAGSLLAFSLGITDIDPIKHGLLFERFLNPERISMPDIDVDF
CMEKRDKVIEYVKSKYGEENVAQIITYNVMKAKQTLRDVARALGVPYSVADSLAKLIPQG
DVQGTWLSLEEMYLVPIKELLDKYGHHRRDIEDHVSKFRKMCSENPEIKTLVEIALKLEG
LTRHTSLHAAGVVISPLPLRERIPLYYDKDQVLATQFDMVNLEELGLIKMDFLGLKTLTE
LERMKQLVEERHKVSINYLSLPLDDPLVYELLRKGNTTGVFQLESVGMKNLLKRLEPDSF
DDIVAVLALYRPGPLKSGLVDSYINRKHGKEQVDYIFPELEPVLKDTYGIIVYQEQVMKI
SQVLAGFTPGQADTLRKAIGKKKKEVMQEMKEKFIRGALERGYNQEKVIKLWNDIEEFAS
YSFNKSHSVAYGYISYWTAYMKAHYPEEFFVVKLSTEKSDKKFINLIKDAKSFGFEILQP
DINESHVDFTIESKGKIRFGLARIKGVGEDTARSIVEARNGRWKGLGDFLKSIDQRKVNK
RVLEALIKAGAFDFTGESREKLLSYMDKASKGGVLPLGDLFGTKVEQKVDPLKYEKEVLG
IYISKHPVDPFEKLLSGKVKWLEELEELQEGTYNFVGVVSDLKVKKTKNGTYMATFNLID
KTGIGHAVAFPDVYEKNKELIKEDALLVLKCLVEWDEELEETKLIVKEVYKPEDFIKGEG
MNVVLVFTKELSDDELLHVKNCLMEHVEQAEGKEVIMDLRINGYRTVLQADPQIKVVPSA
ELIESLQKFGIRLIV
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtttgtgcatctgcaccttcatacccaatactctcttcttgatggagctatt
aagataaaggacctggcaaagaaagccagagagctgggatacaaggctgtagctataacg
gatcacggaaatctctttggtatccttgagttttacagaagtatgaagaaggaaggcata
aagcctataattggcatggaagcttactttacaacaggttcgcgccacgacagaaagggg
aaagcgtcagaagacaacatcacagacaggtacaaccatcaccttattctgattgccatg
aacgatacaggactcaaaaaccttatgcagttatcaagcatatcttaccaagagggtttt
tattacaagccaagaatagactacgaggttttgagccaacactgtgagggtcttattgcc
ataaccgcatgcctcaaaggcgtgcctactcattatgcctccttgggtgatgaggaaaag
gctactcattgggtcaagaagttcaaagacctctttggagaaaacctttacttagagctt
cagtccaaccaactgcccgagcaggagatagccaacaggatactcataaacattgctaaa
aaaatgggtgttaaacttattgccaccaacgactctcattaccttaaccccgacgacaga
cttgcccatcaggtgcttatggcggtgcagatgaaaaagaccctcatggaaatcaagcag
gagagcgctataaagtgttccaacgaagggcttcattttgctggtcctgaggaagtttgg
gagaagtttaaaggcaagtttgaaggctgggaggaggcgctaaaaaatactcttgaggta
gcggagaaggtacaggacagctttgagcttttggaaaacagaggttatctctttcccaaa
tacgatacggaagataaaaccactgcagagtttttaaggcatctggcggtaaagggtctc
aggcagagaatacagcaggggcttgcaaaggacagtcccgagtactggaataggttggag
tatgagcttgaagtggtttttaggatgggctttgaaggatacttcctcatagtgcaggac
tttataaactgggcaaagtctcagagtatccccgttggacccggaagaggctcagctgca
ggatcgcttctcgccttttcattgggtataaccgacattgatcccataaagcacgggctt
ttgtttgaaaggttcttaaatcccgaaagaatatccatgccggacatagatgtggacttt
tgtatggaaaaaagagacaaggttatagagtatgtaaagtccaagtatggagaggagaat
gtagctcagattatcacatacaatgttatgaaggcaaagcagacccttagagatgtagcg
agagctctgggagtgccttactcggtggctgacagccttgccaagctcataccgcaaggc
gatgttcagggcacatggctttcccttgaggaaatgtatctggtacctataaaagaactc
cttgataagtatgggcatcacagaagggacatagaggaccatgtaagcaagttcaggaaa
atgtgttcagaaaatccggagataaaaacgcttgtggagatagctttaaagctggaaggt
ctcacaagacatacatcactgcacgcagcaggtgttgttatatctcctttgccccttcgt
gagcgtatacctctttattacgataaagaccaagttcttgccacccagtttgatatggtc
aatttggaggagcttggactcataaagatggactttctggggcttaagactctcacagag
cttgaaagaatgaaacagttagtagaggagaggcacaaagtcagtataaattacctgagc
ctaccacttgatgatcctctggtttatgagcttctcaggaagggcaacaccaccggagtt
ttccaacttgaaagcgtaggcatgaaaaatcttttaaaaagactggagccagacagcttt
gacgacatagtggctgttcttgccctctacagaccgggacctctaaaaagcggtcttgtg
gacagctacataaacagaaagcacggaaaggagcaggtagattacatcttcccagagctt
gagccagtcttgaaggatacttacggcatcatagtttatcaggagcaggttatgaaaatc
tctcaggtgcttgcaggcttcactccgggtcaagcagacactctccgtaaagcaataggc
aagaagaagaaggaagttatgcaggaaatgaaggagaagtttatcaggggggcgctggaa
agaggttataaccaagaaaaggtgataaaactctggaatgacattgaggagtttgccagc
tactctttcaacaaatctcactcagttgcttacggctacatatcctattggacagcttat
atgaaggcacactatccggaagagttttttgtggtaaaactctccacagaaaagagcgac
aagaagtttataaatctcataaaggatgccaaaagttttggttttgaaatactccagccg
gacataaacgagagtcatgtggactttaccatagagtcaaagggcaaaattaggtttgga
ttggcaaggataaagggggtaggagaggatacagccaggtccatagtggaagcaagaaat
ggaagatggaaaggcttaggggactttttaaaaagcatagatcagaggaaggtaaacaag
agggtgcttgaggcgcttataaaagcaggcgcttttgactttactggagagagcagagaa
aaacttctttcttacatggataaagcttcaaaaggaggagttttacctttgggagacctc
tttggtacaaaggtagagcaaaaagtggacccactaaagtacgagaaggaagttcttggc
atatatatttccaagcatccggtggatccttttgaaaaactcctatcaggaaaagtaaag
tggcttgaagagcttgaggagttgcaggaaggcacctacaattttgtgggcgttgtgtcc
gaccttaaggttaaaaagacaaagaatggcacctacatggcaacctttaacctcatagac
aaaaccggcataggtcacgctgtagctttccccgatgtttatgagaaaaacaaggagctt
ataaaggaagatgctcttttggttcttaagtgccttgttgaatgggacgaggaattagag
gagactaaactgatagttaaagaagtatacaagccagaagactttataaaaggagaaggc
atgaatgttgtgttggtatttactaaagagctttccgatgatgagcttctgcatgtaaaa
aactgcctcatggagcatgtggaacaggcagaaggtaaggaggtcataatggacctgcgt
ataaacggatatagaactgtgttgcaggcagacccacaaataaaagtggtcccaagtgct
gaacttatagaaagcctacagaagttcggcatcagactgatagtttag
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