Halorhabdus tiamatea: HTIA_0041
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Entry
HTIA_0041 CDS
T02781
Name
(GenBank) transcription initiation factor B
KO
K03124
transcription initiation factor TFIIB
Organism
hti
Halorhabdus tiamatea
Pathway
hti03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HTIA_0041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hti03021
]
HTIA_0041
Transcription machinery [BR:
hti03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HTIA_0041
Prokaryotic type
Archaeal type
TFB
HTIA_0041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Zn_ribbon_RRN7
A2L_zn_ribbon
Sigma70_r4
Zn_ribbon_tTFIIB
GFA
Cyclin_C
DZR
DUF1272
Auto_anti-p27
DZR_2
Zn_ribbon_IS1595
Zn_ribbon_3
NinF
Zn_ribbon_TFIIB
Zn_ribbon_Top1
Zn_ribbon_19
Motif
Other DBs
NCBI-ProteinID:
CCQ32193
UniProt:
F7PI62
LinkDB
All DBs
Position
complement(40608..41579)
Genome browser
AA seq
323 aa
AA seq
DB search
MSDTTLRSHERTNQRETTTEEETETHVCPECGGDLVTDSERGETVCAECGLVVEEDEIDP
GPEWRAFDAKEKDQKSRVGAPTTNMMHDKGLSTNIGWQNKDAYGNSLSSRQREKMQRLRT
WNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDENLLPGRSIEGV
STASLYAAARQAGNPRSLDEIDNVSRVEKDEVARTYRYVVRELNLEVKPADPTSYVPRFA
SDLDLSEEAERHARDLLENAKREGVHSGKSPVGLAAAAIYAASLLANEKVTQNEVSEVAN
ISEVTIRNRYHELLEAKQDIRTA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataccaccctcagaagccacgagcgaacgaatcagcgagagactaccaccgag
gaagagacagagacccacgtctgtccggagtgtggtggcgacctggtaacggactcggaa
cgcggagagaccgtctgtgcggagtgtgggctcgtcgtcgaggaggacgagatcgatccg
ggtccggaatggcgcgccttcgacgccaaggagaaagaccagaagtcccgtgtcggtgca
ccgacgacgaacatgatgcacgacaagggcctctcgacgaacatcggctggcagaacaag
gacgcctacggaaactcgctgtccagccgtcagcgcgagaagatgcagcgcctccggacc
tggaacgagcgtttccgcacgcgcgattcgaaggaacgcaacctcaagcaggccttaggc
gagatcgaccggatggcctcggcgctgggactccccgagaacgtccgtgagactgcaagc
gtcatctaccggcgagcactcgacgagaacctcctgccggggcgctccatcgaaggtgtc
tcgaccgcatcgctgtatgcggccgcccgccaggccggcaatccccgtagcttagacgag
attgacaacgtctcccgcgtcgagaaagacgaggtcgcccggacgtaccgctacgtcgtc
cgcgagctcaacctcgaagtcaagccggccgatccgacgagttacgtcccgcggttcgcc
tcagacctcgatctgagcgaggaagccgaacgccacgcccgcgacctgctcgagaacgca
aagcgggagggcgtccactcaggaaagagcccggtcggcctcgccgctgcggcgatctac
gccgcctcgctgctggcaaacgagaaagtgacccagaacgaggtcagcgaggtcgcgaac
atctccgaggtcacaatccgcaaccggtatcacgaactcttggaagcaaagcaggacatc
cggacggcctga
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