KEGG   Halorhabdus tiamatea: HTIA_0064
Entry
HTIA_0064         CDS       T02781                                 
Name
(GenBank) TATA-box binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hti  Halorhabdus tiamatea
Pathway
hti03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HTIA_0064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hti03000]
    HTIA_0064
   03021 Transcription machinery [BR:hti03021]
    HTIA_0064
Transcription factors [BR:hti03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    HTIA_0064
Transcription machinery [BR:hti03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     HTIA_0064
  RNA polymerase III system
    TFIIIB
     HTIA_0064
  RNA polymerase I system
    SL1/TIF-1B
     HTIA_0064
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-ProteinID: CCQ32215
UniProt: S6D175
LinkDB
Position
67233..67754
AA seq 173 aa
MVGSGEFDLELDLEVLARDLGDVAEYDPDGHTGMHIRLSNGALVTLYRTGSYHIVGIESE
QGLTESREELIERLQRLEIQFDPSADGFGVRNIVCTGDYGEAVNLNALTIGLGLENVEYE
PEQFPGLVYRPEGFDAVVLVFASGKLVITGLTTLNTASQVLDSVSADISELLP
NT seq 522 nt   +upstreamnt  +downstreamnt
gtggtcgggtccggggagttcgatttggagcttgatttagaggttcttgcacgcgattta
ggcgacgttgcagagtacgacccggacgggcacacagggatgcatatccgcctctccaac
ggggcgttggtaacactgtaccggactgggagttaccacatcgtcgggattgaatcggag
caaggtctgaccgaatcgcgtgaggagctcatcgagcgattacagagacttgagatccag
ttcgacccgtcggcagacgggttcggtgtccggaacatcgtttgtactggggactacgga
gaagctgtgaatttgaacgcgctcacgatcgggttagggcttgagaatgtcgagtatgag
cctgaacagttccccgggttagtgtaccggccggagggcttcgatgcggtcgtgttagtg
ttcgcatcaggaaagctcgtgattacgggtttaactactcttaacacggcgtcccaggtg
ctcgattccgtgagtgcggatatcagtgagttactgccgtag

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