Halorhabdus tiamatea: HTIA_0064
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Entry
HTIA_0064 CDS
T02781
Name
(GenBank) TATA-box binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hti
Halorhabdus tiamatea
Pathway
hti03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HTIA_0064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hti03000
]
HTIA_0064
03021 Transcription machinery [BR:
hti03021
]
HTIA_0064
Transcription factors [BR:
hti03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
HTIA_0064
Transcription machinery [BR:
hti03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
HTIA_0064
RNA polymerase III system
TFIIIB
HTIA_0064
RNA polymerase I system
SL1/TIF-1B
HTIA_0064
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
CCQ32215
UniProt:
S6D175
LinkDB
All DBs
Position
67233..67754
Genome browser
AA seq
173 aa
AA seq
DB search
MVGSGEFDLELDLEVLARDLGDVAEYDPDGHTGMHIRLSNGALVTLYRTGSYHIVGIESE
QGLTESREELIERLQRLEIQFDPSADGFGVRNIVCTGDYGEAVNLNALTIGLGLENVEYE
PEQFPGLVYRPEGFDAVVLVFASGKLVITGLTTLNTASQVLDSVSADISELLP
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgggtccggggagttcgatttggagcttgatttagaggttcttgcacgcgattta
ggcgacgttgcagagtacgacccggacgggcacacagggatgcatatccgcctctccaac
ggggcgttggtaacactgtaccggactgggagttaccacatcgtcgggattgaatcggag
caaggtctgaccgaatcgcgtgaggagctcatcgagcgattacagagacttgagatccag
ttcgacccgtcggcagacgggttcggtgtccggaacatcgtttgtactggggactacgga
gaagctgtgaatttgaacgcgctcacgatcgggttagggcttgagaatgtcgagtatgag
cctgaacagttccccgggttagtgtaccggccggagggcttcgatgcggtcgtgttagtg
ttcgcatcaggaaagctcgtgattacgggtttaactactcttaacacggcgtcccaggtg
ctcgattccgtgagtgcggatatcagtgagttactgccgtag
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