Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA gyrase subunit B
|
KO |
|
Organism |
|
Brite |
KEGG Orthology (KO) [BR:hti00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:hti03032]
HTIA_0147 (gyrB)
03400 DNA repair and recombination proteins [BR:hti03400]
HTIA_0147 (gyrB)
Enzymes [BR:hti01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HTIA_0147 (gyrB)
DNA replication proteins [BR:hti03032]
Prokaryotic type
DNA Topoisomerases
HTIA_0147 (gyrB)
DNA repair and recombination proteins [BR:hti03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HTIA_0147 (gyrB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
148828..150741
|
AA seq |
637 aa
MSDDNDYGAGQIQVLEGLQAVRKRPAMYIGSTDTRGLHHLVYEVVDNAIDEALAGHCDTI
AVTMHDDGSVSVVDDGRGIPIDTHEEYDRPAVEVIMTVLHAGGKFDNKSYQVSGGLHGVG
VSVVNALSAKLEVEVRREGSVWKQTFDHGAPADDLTEIEALEDSSETGTSIRFWPDGDIF
ETTDFQFSTLENRLRELAFLNSGVEITLADERDQRRETFQYDGGIREFVEYLNETKDPLH
DGVIYFEDESEGVQVEVALQATTELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYA
TDNDLLSDIEETLKGEDIREGMTAVISVKHPDPQFEGQTKTKLGNSEVRGVVESAMHQNL
GTYFEEHPDVAGAIVRKAVEAAKARKAAQKAEELTRRKSALESTALPGKLADCQTKEPSE
AELFIAEGDSAGGSAKQARNPEFQAVLPIRGKILNVEKHRLDRILENDQIRNIITALGTG
VGDEFDIDELRYEKIIFATDADVDGAHIRTLLLTFFYRHMRPLLENGHIYAARPPLYRIR
YRGETYDAMTDAERDEIIEEKCDGNPTQIQRFKGLGEMNPKQLWDTTMNPENRFLKQITI
DDAAAADKMFSVLMGDAVEPRKQFIKENSPEANWVDI |
NT seq |
1914 nt +upstreamnt +downstreamnt
atgagtgacgacaacgactatggggccggccagattcaggtcctggagggcctacaggcc
gtcaggaaacggccggcgatgtacatcggttctaccgacaccaggggattgcatcacctc
gtctacgaggtggtcgacaacgccatcgacgaggcgctcgcgggacactgtgacacgatc
gctgtcaccatgcacgacgacgggtccgtctcggtagtagacgacgggcgcggcattccg
atcgacacccacgaagaatacgaccggccggccgtcgaggtcatcatgaccgtcctgcac
gccggcgggaagttcgacaacaagtcatatcaggtctcgggtggcctccacggcgtcggc
gtctcggtcgtcaacgcgctctcagcgaaactcgaagtcgaagttcgccgggagggcagc
gtctggaagcagacgttcgatcacggcgcgcccgcagacgacctcacggagatcgaggcg
ctcgaagattcgtcggagacgggcacgtcgattcgattctggcccgacggcgacatcttc
gagacgacagatttccagttttcgacgctcgaaaaccgccttcgggaactcgcctttctc
aattccggcgtcgagatcacactcgcagacgagcgagaccagcgccgggaaaccttccag
tacgacggcgggattcgggagttcgtcgagtacttaaacgagacgaaagaccccctgcac
gacggggtcatctacttcgaagacgagagcgagggcgtccaggtcgaggtcgccctccag
gcgaccaccgagttgcagggctcgattcatgccttcgcgaacaacatcaacacccgcgag
ggcgggacacacctaaccgggttcaaaacggccttgactcgggtcgtcaacgactacgcc
accgacaacgacctcctctcggacatcgaggagacgctcaagggcgaggacatccgcgag
gggatgacggcggtcatctcggtcaagcaccctgacccgcagttcgaaggccagaccaag
accaaactcggcaacagcgaggtccggggcgtcgtcgagagcgcgatgcaccagaatttg
gggacgtacttcgaggagcacccggacgtcgcgggggcgatcgtccggaaggctgtcgag
gccgccaaggcccgcaaggccgcccagaaggccgaggagctcacccgtcgaaagagcgcc
ctcgagtcgacagcgctgcccgggaagctggcggactgccagacgaaagaacccagcgag
gccgagctgtttatcgccgagggggacagcgccggcggcagtgccaagcaggcgagaaat
ccggaatttcaggctgtcctgccgatccgcgggaagatcctcaacgtcgagaaacaccgc
ctcgaccggatcttagagaacgaccagatccgcaacatcatcaccgcgctggggaccggc
gtcggcgacgagttcgatatcgacgagctccgctacgagaagatcatcttcgcgactgac
gccgacgtcgacggggcacacatccggacgctgttgctcacgttcttctatcggcacatg
cgaccgctactggagaacgggcacatctacgccgcccgcccgccgctgtatcggatccgg
tatcgcggcgagacctacgacgcgatgaccgacgccgagcgcgacgagatcatcgaggag
aagtgcgacggcaaccccacccagatccagcggttcaagggcctgggcgagatgaatccc
aagcaactctgggacacgaccatgaatcccgagaaccgctttttgaagcagatcacgatc
gacgacgccgcggccgccgacaagatgttctcggtgctgatgggcgacgccgtcgaaccg
cgcaagcagttcatcaaggagaattcgccggaagctaactgggtcgatatatga |