Halorhabdus tiamatea: HTIA_0182
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Entry
HTIA_0182 CDS
T02781
Name
(GenBank) uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hti
Halorhabdus tiamatea
Pathway
hti03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HTIA_0182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hti03400
]
HTIA_0182
Enzymes [BR:
hti01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HTIA_0182
DNA repair and recombination proteins [BR:
hti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HTIA_0182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Znf_XAF1_N
Motif
Other DBs
NCBI-ProteinID:
CCQ32333
UniProt:
F7PHX2
LinkDB
All DBs
Position
178742..179374
Genome browser
AA seq
210 aa
AA seq
DB search
MSPDLPDPRNPYSMDEDCQNCPALVESRTQVVHGYGDPTADIAVLGTAPTASADRTGIPF
TGDETGEVIQALLGDLGLSDSPPDSTEPALSEVYLTYVTRCHHPERGATDEERHNCEGYR
TAELRRINPELIVAVGQGALDALAFEYTTRSADDLDVTVEHATTIQGRGFEILPMIEPAD
ASESQLATFREHVADELDRDYRQTKGQRRK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgagcccggacctcccggatccacggaacccctacagcatggacgaggactgtcagaac
tgtccggcactggtcgaatcacggacccaggtcgtccacggctacggtgacccgacggcg
gatatcgccgttctcggcaccgctccgacggccagtgccgatcgaaccgggatccccttc
accggcgacgagactggcgaagtgatccaggcactcctcggtgacctcggactcagtgac
tcaccaccggacagtaccgaacctgcactgagcgaggtctatctcacgtacgtcacgcgc
tgccatcaccctgaacgcggggcaaccgacgaggagcgacacaactgcgaggggtatcgt
acggcagaactccgacggatcaacccggaactcatcgtcgccgtgggccagggtgccctg
gacgcgttggctttcgagtacacgacccgaagtgccgacgatctggacgtcacggtcgag
cacgcgacgacgatccagggccggggcttcgaaatcctcccgatgatcgaaccggctgac
gcttctgaatcccagttggctaccttccgcgaacacgtcgccgacgaactcgaccgcgat
taccgacagacgaagggccagcgccggaagtag
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