KEGG   Halorhabdus tiamatea: HTIA_0238
Entry
HTIA_0238         CDS       T02781                                 
Name
(GenBank) replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
hti  Halorhabdus tiamatea
Pathway
hti03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HTIA_0238
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hti03032]
    HTIA_0238
DNA replication proteins [BR:hti03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     HTIA_0238
SSDB
Motif
Pfam: AAA RCF1-5-like_lid AAA_22 RuvB_N DNAX_ATPase_lid AAA_16 AAA_assoc_2 AAA_5 AAA_14 AAA_25 nSTAND3 AAA_2 AAA_lid_RFC1 AAA_28 DUF815 RNA_helicase IstB_IS21 AAA_33 VapE-like_dom HP_1247_M AAA_7 Mg_chelatase AAA_24 NPHP3_N Bac_DnaA RsgA_GTPase Presenilin
Other DBs
NCBI-ProteinID: CCQ32388
UniProt: F7PHR4
LinkDB
Position
complement(234086..235582)
AA seq 498 aa
MTDWTETHRPSTLTEVRGNDKARDALQEWADTWPDHREAVILYGSPGVGKTSAAHALAND
MDWPTIELNASDSRTKDVIERVAGEAAKSGTLTQGGSGRRLVILDEADNLHGNVDRGGTR
AITSLVKEAQQPMVLIANEFYEMSNGLRNACRDIEFRDVSARSIVPVLRDICRQEDVGFE
EDALRKIAEMNDGDLRGAINDLQAIAEGRETVTEDDVVTSERDRTTDIFSFLDTVLKEAD
AQEALEASYDVDETPDDLISWIEDNVPKDYEGAELAAAYRSLANADRWLGRVRATQNYTF
WRYASDAMTAGVAAARSGEKGGWTRYGPPSYWSKLGRTSGARDTRDDVARAIATESGVSM
STARREVLPYLETMTHHCTNRELTVAMTGAYDLDPDHVAFITGSGADTNKIASIVEDAAE
RRETAAVDASEGAFESGETDESSSEGAVQGNERAETADETTPESQAVETDAASSQEEAEP
SGEEDDSDDQQTGLGDFV
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgaccgactggacggagacacatcgtccttcgacactcacggaggtgcggggcaacgac
aaggcccgcgacgcccttcaggagtgggctgacacctggcccgaccaccgcgaggccgtc
atcctctatggctcgccgggcgtcgggaagacctccgcggcccacgcgctcgccaacgac
atggactggccgacgatcgaactcaacgccagcgactcccggacgaaagacgtcatcgag
cgggtcgcgggggaggcagccaaaagcgggacgctcactcaaggggggtcagggcggcga
ctcgtcatcctagacgaggccgacaacctccacggcaacgtcgaccgcggcgggacgcgg
gcgatcacctcgctggtcaaggaggcccaacagccgatggtcctcatcgccaacgagttc
tacgagatgagcaacgggctccgcaacgcctgccgcgacatcgagttccgagacgtctcc
gcccggtcgatcgtgcccgtcctccgggacatctgccgccaggaggacgtcgggttcgaa
gaagacgcactccggaagatcgcggagatgaacgacggcgatctccggggcgcgatcaac
gatctgcaggccatcgcggagggtcgggagaccgtaaccgaagacgacgtcgtgaccagc
gaacgcgatcggacgactgacatcttttcgtttctcgacaccgtcctgaaggaagcagac
gcccaggaagccctcgaagcgtcctacgatgtcgacgagacgccagacgacctcatctcc
tggatcgaggacaacgtgcccaaggactacgagggggcggaactcgccgcagcctaccgt
tcgctcgcgaacgccgaccggtggctcggtcgggttcgggcgacgcagaactacaccttc
tggcgatatgcgtccgacgctatgacggccggcgtcgcggcggctcgaagcggcgagaaa
ggcggctggacacgctacggcccgccgagttactggtcgaaacttggtcgaactagcggt
gcgcgggacacccgcgacgacgtcgctcgggccatcgcgacggaaagcggcgtcagcatg
tctaccgcacgccgcgaagtgctaccctatctggagacgatgacccaccactgcacgaac
cgcgagttgacggtcgcgatgaccggggcgtacgatctcgatcccgaccacgtggcgttc
atcacgggcagcggtgcggacacgaacaagatcgcctcgatcgtcgaggacgcggcggaa
cgtcgggagaccgccgccgtcgacgcctcggaaggtgcgttcgagtcgggggaaaccgac
gaatcgtcgtcggaaggtgctgtgcaagggaacgagcgggcggagacagccgacgagacc
acgcccgaatcgcaagcagtcgagactgatgcagcttcgagtcaggaggaggctgaaccg
agcggcgaagaagacgacagcgacgaccaacagaccgggctcggggacttcgtctag

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