Halorhabdus tiamatea: HTIA_0467
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Entry
HTIA_0467 CDS
T02781
Name
(GenBank) archaeal transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hti
Halorhabdus tiamatea
Pathway
hti03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HTIA_0467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hti03021
]
HTIA_0467
Transcription machinery [BR:
hti03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
HTIA_0467
Prokaryotic type
Archaeal type
TFE
HTIA_0467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_8
Sigma70_r3
DUF7129
Zn_Ribbon_TF
Zn_ribbon_6
Zn_ribbon_LysW
RUBY_RBDX
DUF7560
HypA
PKcGMP_CC
DNA_ligase_ZBD
Zn_ribbon_TiaS
HSBP1
Motif
Other DBs
NCBI-ProteinID:
CCQ32612
UniProt:
F7PN56
LinkDB
All DBs
Position
446874..447398
Genome browser
AA seq
174 aa
AA seq
DB search
MAFEEYLEDPVIQKYLHELVGPTGMPVAAAPPDGEVTDEELAEELGLELNDVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFEYDNIPEQLESEMYDLHAALDERREYELDHEFYLCE
NCGIRFEFGDAMDYGFECPDCGSSLEAMENTALIDSMDERIDELESELNLDIET
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggaatacctcgaggaccccgtcatacagaagtacctccacgaactcgtg
ggaccgacgggcatgccggtcgcggccgcaccgcccgacggcgaagtcaccgacgaggaa
ctcgccgaggaactcgggctggaactcaacgatgtccgccgggcgctgttcattctctac
gagaacgacctggcgagttaccgccggctcagagacgaggactcggggtggttgacgtat
ctctggactttcgagtacgacaacatccccgaacaactcgaatcggagatgtacgacctc
cacgcggccttagacgagcgtcgggagtacgaactcgaccacgagttctacctgtgtgag
aactgtggcatccgcttcgagttcggcgacgcgatggactacggcttcgagtgtccggac
tgtggctcgtcgctcgaagcgatggagaacaccgcgctcatcgactcgatggacgaacgc
atcgacgaactcgagagcgaactcaacctggacatcgaaacctga
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