Halorhabdus tiamatea: HTIA_0494
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Entry
HTIA_0494 CDS
T02781
Name
(GenBank) RNase L inhibitor
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
hti
Halorhabdus tiamatea
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hti03009
]
HTIA_0494
Ribosome biogenesis [BR:
hti03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
HTIA_0494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
AAA_22
AAA_16
AAA
Rad17
RNA_helicase
NACHT
nSTAND3
RuvB_N
AAA_33
AAA_23
Fer4
AAA_5
RsgA_GTPase
Fer4_6
NB-ARC
Fer4_9
Fer4_10
Fer4_7
Motif
Other DBs
NCBI-ProteinID:
CCQ32639
UniProt:
F7PMZ6
LinkDB
All DBs
Position
470473..472305
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AA seq
610 aa
AA seq
DB search
MADDSIAVVDLDRCQPDRCNYECSNFCPPNRTGKECIVTREDHYDDGEPFEGAPDQVWIS
EEICLGETCGICVEKCPFDAIQIINLPQELEDNPVHRYGDNAFSLYGLPAPGEGRVTGIL
GPNGIGKTTAVHILADELTPNLGDSATGGDWESVLEEYRGTALQDYLESLLDGDVTVARK
PQYVDEIPDQFDGTTRALLEGTDERGVLDELIERVGIEPVVDQDIDTLSGGELQRVALVA
ALARDADFYFLDEVSPYLDIGQRMTAARLIQEMAEEEDRSMLVVEHDLAILDLLADVIHV
GYGEPGAFGVITDPKSVKNGINEYLSGYLENENMRIRQNAIEFEEHAPRSVSTGDVVIEY
PGLEKSYGEGEFSLSVESGTIRESEVLGVVGPNGIGKSTFAKLLADRLEPDTGELDASVD
ISYKPQYVEVDQPMRVDAFLGSIAEDFGTSYWNTEIAQPLQLDRIMDQQLTDLSGGERQR
VAIAACLSRDADLYLLDEPSAHLDVEQRVLATSAIRRYAENHDATAMVIDHDIYMIDLLA
DRLLVFDGEPAVAGHASTPQSMRSGMNDFLSNLDITFRRDERTGRPRINKPESRLDREQK
QAGEYYYAPE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgattctatcgccgtcgtcgacctcgaccgatgccagcccgaccgctgtaac
tacgagtgttcgaacttctgtccgcccaaccggacgggcaaggagtgtatcgtcactcgc
gaagaccactacgacgacggggaacccttcgaaggtgctccggaccaggtctggatcagc
gaggagatctgtctgggcgaaacctgtgggatctgcgtcgagaagtgtcccttcgatgcg
atccagatcatcaatcttccccaggaactcgaggacaacccggtccaccgctacggcgac
aacgccttctcgctgtacggtctgccggcccccggagaggggcgcgtaacgggtattctc
gggccgaacgggatcgggaagaccacggccgtccacatcctcgcggacgaactcacgccg
aaccttggagacagcgccacgggcggagactgggagtccgtcctcgaggagtatcgcggt
accgcactccaggactacctcgaatcgctgctggacggtgacgtgaccgtcgcccgcaag
ccccagtacgtcgacgagatccccgatcagttcgacggcacgacccgcgcactgctggaa
ggcaccgacgagcgcggcgtcctcgacgagttgatcgagcgcgtcggcatcgaaccggtc
gtcgaccaggacatcgatacgctctcgggcggggaactccagcgggttgcgctcgtggcc
gccctcgcgcgggacgcggacttctacttcctcgacgaggtctcgccgtatctggacatc
ggccagcggatgaccgcagcacggctcatccaggagatggccgaagaggaggatcgttcg
atgctggtcgtcgaacacgacctggctattctggatctcctcgccgacgtgatccacgtc
gggtacggtgagcccggcgcgttcggggtcatcacggaccccaagtccgtcaagaacggg
atcaacgagtacctctcggggtatctcgagaacgagaacatgcggatccgccagaacgcc
atcgagttcgaggagcacgctccccgatcggtctcgacgggcgacgtcgtgatcgagtat
cccggtctggagaagagttacggcgaaggtgagttctcgctgtcagtcgagtcggggacg
atccgcgagagcgaagttctgggcgtcgtcgggcccaacgggatcgggaagtcgacgttc
gcgaagttgctggccgaccggctcgaacccgatacgggcgaactcgacgcgagcgtcgac
atctcctataagccccagtacgtcgaggtcgaccagccgatgcgcgtcgacgccttcctc
gggtcgatcgccgaggacttcggcacctcctactggaacacggagatcgcccagccgctc
cagctcgaccggatcatggaccaacagctcacggacctctcgggtggcgaacgccagcgc
gtcgcgatcgcggcgtgtctctcccgggacgccgatctctacctgctcgacgagcccagc
gcccacctcgacgtcgaacagcgcgtcctggcgacgtcagccatccgccggtacgccgag
aaccacgacgcgacggcgatggtcatcgaccacgacatctacatgatcgacctgctcgcc
gaccgactgctggtcttcgacggcgaacccgccgtcgccggtcacgccagcaccccccag
tcgatgcgctcgggcatgaacgacttcctgagtaacctcgatatcaccttccggcgtgac
gaacgcacgggtcgcccgcggatcaacaagcccgagagtcgcctcgaccgcgagcagaaa
caggccggcgagtactactacgcgcccgagtga
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