Halorhabdus tiamatea: HTIA_0502
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Entry
HTIA_0502 CDS
T02781
Name
(GenBank) RNA-binding protein
KO
K22469
ribonuclease FAU-1 [EC:3.1.26.-]
Organism
hti
Halorhabdus tiamatea
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hti03009
]
HTIA_0502
Ribosome biogenesis [BR:
hti03009
]
Prokaryotic type
rRNA processing factors
HTIA_0502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF402
S1
Tcp10_C
Motif
Other DBs
NCBI-ProteinID:
CCQ32647
UniProt:
F7PMY8
LinkDB
All DBs
Position
477992..479386
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AA seq
464 aa
AA seq
DB search
MTDRELLTVRIRGIYATALTERLREAEGVTVVQASPPIRRRFETTFGDGPADVTIETDDR
RLGVGLVGSRDGVDRVRDALDVGIDTLGWDDPTPQGAIFDGVVTETLGSGAVVDLGESEG
FLPFHATSAHVETDDRLRVQVTEPPAPWNDDRPALDTTLSVRGDMATLVREESTSAAGPD
LLDVLSVDVPDGWRVLWDRDADDADFDVLEASLDGLLDRAARIDDALSTHDEDTTTDRIV
DSRATQWVLFGRESRFALDEDRRAVTPTMPGHHRIKAGDEAASAAVDFVEDLAPDLDGEF
PFDVVTRQFGPQEGDRVAIAHGKPDGRTISLGRGDVTERNPAGTIRVEREMSPGGTYDAL
GTKRRAGDVAVTKFTEGKWWYPTVYRGEDGDRRGTYVNVCTPVEVFPDEVRYVDLHVDVV
KHADGTVERVDDDELDAAVEAGNVPEELAEKARDVASAVENALS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgagagctactcaccgtacgaatacggggcatctacgcgacggcactgacc
gaacgcctgcgtgaggcggaaggcgtcaccgtcgtccaggcatcgccgccgatccggcga
cgcttcgagacgaccttcggcgacgggccggccgacgtcacgatcgaaaccgacgaccgg
cgactgggtgtcggtctcgtcggatcccgggatggtgtcgatcgcgtccgcgacgcgctc
gacgtcgggatcgacacgctcgggtgggacgatccgacgccacagggtgcgatcttcgac
ggcgtcgtcaccgaaacgcttggcagtggggccgtcgtcgatctgggcgagagtgagggg
tttctgcccttccacgcgaccagcgcccacgtcgagaccgacgaccgactccgcgtgcag
gtcacagagccgccagccccctggaacgacgaccgtccggcactcgatacgacgctgtcg
gtgcgtggtgacatggcgacgctcgtccgcgaggagtcgacgagtgcggctggcccggat
ctgctcgacgtgctctcggtcgacgtgcccgacggctggcgtgtcttatgggaccgggac
gccgacgatgccgacttcgacgtcctcgaggcgagtctcgacggactgctcgaccgggcc
gcccggatcgacgacgcgctttcgacccacgacgaggatacgacgaccgaccggatcgtc
gacagtcgcgccacgcagtgggtactctttggccgcgaatctcgcttcgcactcgacgag
gaccgccgggcggtgacgccgacgatgccgggtcaccaccggatcaaggcgggcgacgag
gccgcgagcgccgccgtcgatttcgtcgaggatctcgcgccggacctcgatggggagttc
ccgttcgacgtcgtgacgcggcagttcggcccgcaggagggggatcgcgtcgccattgct
cacggcaaacccgacggccggacgatcagcctcggccgcggcgacgtcaccgagcggaac
ccggcagggaccatccgggtcgagcgcgagatgtcgcccggcgggacctacgacgcgctg
ggcacgaagcgccgggcgggcgacgtcgcggtcacgaagttcaccgagggcaagtggtgg
tatccgaccgtctaccgcggcgaggacggcgacaggcgcgggacctacgtcaacgtctgc
acgcccgtggaggtgttcccggacgaggtccggtacgtcgatctacacgtcgacgtggtc
aaacacgctgacgggacagtcgagcgggtcgacgacgacgaactcgacgcggctgtcgag
gcagggaacgtccccgaggaactcgccgagaaagcccgcgatgtagcgagtgcggtcgag
aacgcgctgtcgtga
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