Halorhabdus tiamatea: HTIA_0550
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Entry
HTIA_0550 CDS
T02781
Name
(GenBank) archaeal DNA polymerase I, intein-containing
KO
K02319
DNA polymerase, archaea type [EC:
2.7.7.7
]
Organism
hti
Halorhabdus tiamatea
Pathway
hti03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HTIA_0550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hti03032
]
HTIA_0550
Enzymes [BR:
hti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HTIA_0550
DNA replication proteins [BR:
hti03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
B-family DNA polymerases
HTIA_0550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
Hint
Hint_2
LAGLIDADG_3
Intein_splicing
PT-HINT
CDC50
Motif
Other DBs
NCBI-ProteinID:
CCQ32695
UniProt:
F7PMU1
LinkDB
All DBs
Position
525623..529588
Genome browser
AA seq
1321 aa
AA seq
DB search
MTDSGEQRGLGEFADGDRPAAEARAVAGNGGHEASVVDAEEWRYPEAEGTVEFEVTQVDY
TIEGGGSDEYPVLHVFGRTDDRALVHVQVYEFRPYFYAPAGNVDQERLASYDSVTGWERT
GKDGEPYESIRGEHLVRIFGRTPRDVGQIRDDFDHYEADILFPNRLLIDKDITSGVRVPE
RRTENGTIRIPHDEIEAIDYDAEARVNTFDIEVEDRSGFPEDGEEPIICLTSHDSYRDEY
VVWLYDSPVGIDPPEALDRYEPLEDDFEADVRVFDEEEAMLEAFLDYIEETDVDIMTGWN
FSDFDAPYFIDRLQELDPGTDRNLDMNRLSRVNEVWESDWQGPDIKGRVVFDLLRAYKRT
QFTELDSYRLEDVGQAELGAGKETYTGDIGTLWEDDPERLLEYNLRDVELCVELDRKQDI
IAFFEEVASFVGSKLEDAPTPGDAVDMYVLHKAFGNFVLPSKGTVESGEEFEGGAVFEPI
SGIKEMVSVHDLKSLYPMCMVTINASPETKVDPETYDGETFRAPDPSGQHFRTEPDGIVR
EMVEELLSEREEKKALRNDHDPGTEAYELYDRQQGAVKVIMNCFTPDTEVLTPAGVQNIR
DLNVGDDVYSIDPDTLEVQVKPVTETWEYPEYDGELVDIGTSKIDFSVTPNHRMLVRKNE
TNGISWDEDDYRFVEAGDLDDATNYQLPHDWSMNHGDPIDDVDLTEWIDGDYEVWVRPSV
HGHTFTAELGWTPRRVPKADAGEVGYVFTAEEFEEHREYIESVCEYNFIHRESGRKWIPR
MYDGDDFLELLAWYITEGNVYTSEEKDFGANHRGSATTVKIAQQTETVTDGGSPDDTDHA
EIGQLLDRMDFDYYVDDRAYQFTSALLGDLLRDVAGEGSAEKHIPEFVFDLDESQKRRFL
KTLISGDGDRQTGSWRYTTSSERLRDDILRLCTHLGYTANYNRDSGSWRIYVTEDSKNTL
RMHRSAERSRADNGVYSITVADNHTVLAGRNGKFQWVGQSLYGVSGWDRFRLYDKDNAAA
VTATGRSVIEYTESAVNDLGYDVTYGDTDSVMISMGTDMSVEDAIDRSFEIEEAINASYD
EFARETLQAEEHRFQIEFEKLYRRFFQAGKKKRYAGHIVWKEGKDVDDIDITGFEYQRSD
IAPITKRVQKEVLDLIVTEGDVEAVTEYLHDVIEDFQAGNVDVEDVGIPGGIGKRLNNYD
TDTAHVRGAKYANLLLGTNFQRGSKPKRLYLKKVHPDYYERIEAERDLDPSRDALYGEFK
RDPDVICFEVAEQLPAEFEVDWEKMLEKTLRGPIARVIEALGVSWQEVKSGQEQTGLGQY
M
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgactgactccggggagcaacgcggactcggcgagttcgccgacggcgatcggccggcg
gcagaggcgcgggcggttgcaggcaacggcggacacgaggcgagcgtcgtcgacgcggag
gagtggcgctatcccgaagccgaggggaccgtcgaattcgaagtgacgcaggtcgactac
acgatcgagggtggcgggagcgacgaatatcccgtcctgcacgtcttcggacggactgac
gaccgagcactcgtccacgtacaggtctacgagtttcggccgtacttctatgcgccagcc
gggaacgtcgaccaagagcgactcgcaagctacgacagcgtcaccggctgggaacgaacc
gggaaagacggtgagccatacgaatccattcggggagaacatctcgtcaggatcttcggc
cggacgccgcgagacgtcgggcagatccgcgacgacttcgaccactacgaggcggacatc
ctcttcccgaatcggctgctcatcgacaaggacatcaccagcggcgtcagggttcctgaa
cggcgtaccgaaaacggaaccatccggattccccacgacgagatcgaagccatcgactac
gacgccgaggcgcgagtcaacaccttcgacatcgaggtcgaggaccgctcgggtttcccc
gaggacggcgaagagcccatcatctgtctcaccagccacgactcctaccgcgacgagtac
gtcgtctggctgtacgactcacccgtcgggatcgacccgccggaggccctcgatcgctac
gaaccgctggaggacgacttcgaggccgacgtgcgcgtcttcgacgaggaggaggcgatg
ctcgaagcgtttctggactacatcgaagagacggacgtagacatcatgacggggtggaat
ttctcggatttcgacgccccgtacttcatcgaccgattacaggaactcgacccgggaacc
gatcggaacctcgacatgaaccggctctcccgggtcaacgaggtctgggagagcgactgg
cagggaccggacatcaagggtcgcgtcgtcttcgacctcctgcgggcgtacaagcggacg
cagttcaccgaactcgactcctaccgcctggaagacgtcggccaggcggaactgggggcg
ggcaaggagacgtatacgggtgacatcgggacgctgtgggaagacgatcccgagcgcctc
ctggagtacaatctccgtgacgtcgagttgtgcgtcgaactcgaccgcaaacaggacatc
atcgccttcttcgaggaggtcgcctccttcgtcgggagcaaactcgaggatgcgccgacg
cccggcgacgccgtcgacatgtacgtcctccacaaggccttcgggaacttcgtcctgccc
tcgaagggcaccgtcgagtccggcgaggagttcgagggcggggcggtcttcgagccgatc
agcgggatcaaggagatggtcagcgtccacgacttgaaatctctatatccgatgtgcatg
gtaacgatcaacgcatccccggagacgaaagtcgatcccgagacgtacgacggggagacg
ttccgtgcacccgatcccagcggccagcacttccggacggaacccgatgggatcgtccgg
gaaatggtcgaggaattactgtcagaacgagaagaaaagaaggccctccgaaacgatcac
gaccccggaaccgaggcgtacgagctctatgaccggcagcaaggagctgtcaaggttatc
atgaactgtttcacgccggatactgaagtgctgactccggcaggtgttcagaacatccga
gacctcaatgtcggcgatgacgtctactcgatcgatccggacacgctggaagtgcaagtc
aagccggtcactgaaacgtgggagtaccccgagtacgatggggaacttgttgacatcgga
acaagcaagatcgacttcagcgtgacgccgaaccaccggatgctcgttcgaaagaacgag
accaacggcatctcgtgggacgaggatgactaccggttcgtcgaggcgggcgacctcgac
gacgcgacgaactaccaactgccacacgactggtcgatgaaccatggcgacccgatcgac
gacgttgacctcaccgagtggatcgacggcgactacgaggtctgggtgcggccgagcgtg
cacggtcatacattcaccgcagagctcggatggacgccacgtcgcgtgccgaaagcagac
gctggcgaagttgggtacgttttcactgcggaagaattcgaagagcaccgcgaatatatc
gaatcagtctgtgagtacaacttcatccaccgcgagtccggtcggaaatggattccgcga
atgtacgacggcgacgatttcctcgaattgctcgcctggtatattacggaaggaaacgtc
tacacgtcagaggagaaggatttcggtgcaaatcatcggggaagtgcaacgaccgtcaag
atcgcccagcagacagagacggttacagacggcgggagtccggacgacactgaccacgcg
gagatcggtcaactactcgaccggatggatttcgactactatgtcgacgaccgcgcctac
caattcacgtcggcgttgctcggggaccttttgagagatgtcgctggcgaagggagtgcc
gagaagcacatccccgagttcgtctttgatctcgacgagagccaaaagagacgattcctg
aagacgctgatcagcggcgacggcgaccgccagacaggttcgtggcgatatacgacgtcg
agcgagcgattgcgggacgatatcctccgtctgtgtacccatctcggctacaccgccaac
tacaaccgcgacagcggttcctggcgaatctatgtcactgaggattcgaaaaacacgctc
cggatgcatcggagcgccgagcgttcgcgggccgacaacggcgtctactccatcaccgtg
gcggacaaccataccgtccttgcgggccggaacggcaagttccagtgggtcggccagtcg
ctgtacggcgtttcgggatgggatcggttccggctctacgacaaggacaacgcggcggcc
gtgaccgcaacagggcgctcggtcatcgagtacactgaatcggccgtcaacgacctcgga
tacgacgtgacatacggggatactgacagtgttatgataagtatggggacggacatgtcc
gtcgaggatgccatcgaccgttccttcgagatcgaggaggcgatcaacgcctcctacgac
gagttcgccagagagacgctgcaggccgaggaacatcgcttccagatcgagttcgagaaa
ctctaccggcgctttttccaggcgggcaagaagaagcgctacgcgggccacatcgtctgg
aaggagggcaaagacgtcgacgacatcgatatcaccgggttcgagtaccagcgctctgac
atcgcgccgatcaccaagcgcgtccagaaggaagtcctggacctgatcgtgaccgagggc
gacgtcgaggccgtcacggagtacctccacgacgtgatcgaggacttccaggccggcaac
gtcgacgtcgaggacgtcggtatccccggcgggatcggcaagcgcctgaacaattacgac
acggacaccgcccacgtccggggcgcgaagtacgccaacctcctgttggggaccaacttc
cagcgcggcagcaagccaaagcgtttgtatctgaagaaggtccatcccgattactacgag
cggatcgaagccgaacgggatctcgatccgtcacgggacgccctctacggcgagttcaag
cgcgacccggacgtgatctgcttcgaggtcgccgagcaactccccgcggagttcgaggtc
gactgggagaagatgttagagaagaccttgcgcggcccgatcgcccgcgtcatcgaggcg
cttggcgtctcctggcaggaagtcaagagcggccaggaacagaccgggctcggccagtac
atgtga
DBGET
integrated database retrieval system
