Halorhabdus tiamatea: HTIA_0672
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Entry
HTIA_0672 CDS
T02781
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
hti
Halorhabdus tiamatea
Pathway
hti03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HTIA_0672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hti03021
]
HTIA_0672
Enzymes [BR:
hti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HTIA_0672
Transcription machinery [BR:
hti03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HTIA_0672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Intein_splicing
LAGLIDADG_3
DUF4226
Motif
Other DBs
NCBI-ProteinID:
CCQ32814
UniProt:
F7PP17
LinkDB
All DBs
Position
complement(634787..637501)
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AA seq
904 aa
AA seq
DB search
MTDTPTEYDPMNRYGTVDTDIAAVVEDTDLPRRLKTRVYEAIEDRDGVTIEQADDIAKAV
ESRYLDTRVDPLDPVGTVSAQSIGEPGTQMSIPGDERVIVRRDGETDVTEIGSLVDGLTS
VRETTTVEGHEVISAPEGMEVPSLRADERVEWKPLEQVSRHEAPDELLRFELESGRTIRA
TKAHSFVTREDNEIIPVEGSNLDDGDWLPVVRSLDGDEQDSVDLREYLPASDYWYTSTLT
DGGTATLPGGEDQIRNKRQALEAGEIEEHAVYPVQGTVGLPEQFPLDEETGFFVGAFLAE
GNLTDHYVSISNVDETFQNRVRAFAERFDLSVNEYENDSGFATGYDVRVNGTVLADFLRE
VCTVDGEKAVPDFAFGATSSFVRGLLSAYFSGDGNVGKNAVRASSTSDELIDGVTLLLAR
FDIYATFGTQEDSKTLRVPKKFVPAFADRIGMVGERGNELEDLAADVDTDGPDTTDQLPN
FGDSLKQAAEAAGIPSRQVNSAHKRQRVGRNRLVSLVEQIDQAAEERPPQLDALERAVDG
DVVWERIESIQTVEPEGEYVYDFSVAGLETFTTAQGVVTHNTMNTFHYAGVAEIDVTQGL
PRLIELVDARKEPDTPMMTVHLDGEYATERERAHEVVWKIEATRILALGDISTNVADMAV
QINLNPDTLEERWPTADSVDAVAEEIANTIESQLGVETQRTETVIQFGPEEPSYRDLLQL
VEELREIVFKGIEEVSRVVIRKEEMDDGEEEFILYTEGSAFGDVLSIEGVDASRTTCNNI
HEIYSNLGVEAAREAIIDETMNTLEEQGLDDVNVRHLMLVADIMTNNGVIESIGRHGISG
SKDSVLARAAFEVTVSHLLDAAIHGEIDALDGVTENVIVGKPIKLGTGDVNLRMGSHTGG
GAAD
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgacggatactccaaccgaatacgatccgatgaaccgctacgggaccgtcgacacggac
atcgcggccgtcgtcgaggacacggacctcccacgccgcctcaaaactcgcgtctacgag
gccatcgaggaccgcgacggcgtcacgatcgagcaggccgacgacatcgccaaagcggtc
gagtcgcgatatctcgacacccgcgtcgatccgctcgaccccgtcgggactgtgagcgca
cagtcgatcggggaacccggcacgcagatgtcgattcctggtgacgagagggttatcgtc
cgccgggacggcgagaccgacgtgaccgagatcggctcgctcgttgacggtctcacttcc
gtgcgagaaacgacgactgtcgaaggccacgaggtcatctccgcgcccgaagggatggaa
gtcccgtctctccgggcagacgagcgtgtcgagtggaagccactcgaacaggtaagtcgt
cacgaagcgcccgacgaactcctccggttcgaactcgaatccggccggacgatccgggcg
acgaaagcacactcgtttgtcacgcgagaggacaacgagatcatccctgtcgaagggagt
aatctcgacgatggcgactggttacccgtcgtccgttcgctcgacggtgacgaacaggat
tccgtggaccttcgcgagtatctccctgcgagtgactactggtacacgtcgaccctgacc
gatggtgggaccgcgacgctccccggcggtgaagaccagatccggaacaaacgccaggcg
ctcgaagccggcgagatcgaggaacacgctgtctaccccgtccagggaacggtcgggctg
cccgaacagttcccgctcgacgaggaaaccggattcttcgtcggggcgttcctcgccgag
gggaacctgacggatcactacgtttccatctcgaacgtcgacgagacgttccagaatcgg
gtccgtgcgttcgcggagcgcttcgatctctccgtcaacgaatacgagaacgacagcgga
ttcgccactggttacgacgttcgcgtcaatggtaccgttctcgctgacttcctgcgagaa
gtctgcaccgtggacggcgagaaggctgtcccggacttcgcgttcggtgcaacgtcctcc
tttgtccgggggctcctctcagcatacttcagcggggacggaaacgttggcaaaaacgcc
gtccgcgccagctcgacgtccgatgaactgatcgacggtgtcacgcttctgctggcacgg
ttcgatatttacgcgacgttcggcacgcaagaggactctaagacgcttcgggtacccaag
aagttcgttccggcgttcgcggatcgcattgggatggtcggtgagcgcggcaacgaactc
gaggatctggcggccgacgtcgacaccgacggcccggatacgacggatcagctcccgaac
ttcggagattcgcttaaacaggcggccgaagcggcgggcatcccatcacgccaggtcaat
agcgctcacaagcgccagcgagtcggtcgcaaccgtctcgtttcgctcgtcgagcagatc
gaccaagcggccgaggagcgtcccccgcaactggatgcactcgaacgggcagtcgacggc
gatgtcgtctgggaacggatcgaatccatccagaccgtcgaacccgagggcgagtacgta
tacgacttctcggtggccggtctggagacgttcaccaccgcacagggtgtcgtgactcac
aacacgatgaacaccttccactatgcgggtgtcgccgagatcgacgtcacccaggggctg
ccccgactcatcgagctggtcgacgcccgcaaggagcccgacacgccgatgatgaccgtt
catctggacggcgagtacgccaccgagcgcgagcgcgcccacgaggtcgtctggaagatc
gaggcgacgcgcatcctcgcgctgggagacatttcgacgaacgtcgcggacatggctgtc
cagatcaacctcaaccccgacaccctcgaggaacgctggccgaccgccgacagcgtcgac
gcggtcgccgaagagatcgccaacaccatcgaatcccagctcggcgtcgaaacccagcgc
acggagaccgtcatccagttcgggcccgaggagccgtcctaccgggatctcctccagctc
gtcgaggagttacgcgagatcgtcttcaagggcatcgaggaagtctcccgggtcgtcatc
cgcaaagaggagatggacgacggcgaggaggagttcatcctctacaccgaggggtcggct
ttcggtgacgtgctttccatcgagggcgtcgacgcctcccggacgacctgtaacaacatc
cacgagatctacagcaatctgggcgtcgaggccgcccgcgaggccatcatcgacgagacg
atgaacacgctcgaagagcaggggttggacgacgtgaacgtccggcatctcatgttggtc
gccgacatcatgaccaacaacggagtcatcgagtcgatcgggcgtcacggcatctccggc
agcaaggactccgtccttgcccgggcggccttcgaggtcaccgtctcacacctcctcgac
gctgccatccacggcgagatcgatgccctcgacggcgtcacggagaacgtcatcgtcggc
aagccgatcaaactcggcaccggcgacgtcaacctccggatgggcagccacaccggtggc
ggcgcagccgactga
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