Halorhabdus tiamatea: HTIA_0673
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Entry
HTIA_0673 CDS
T02781
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
hti
Halorhabdus tiamatea
Pathway
hti03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HTIA_0673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hti03021
]
HTIA_0673
Enzymes [BR:
hti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HTIA_0673
Transcription machinery [BR:
hti03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HTIA_0673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
DnaJ-X
Motif
Other DBs
NCBI-ProteinID:
CCQ32815
UniProt:
S6D1Y7
LinkDB
All DBs
Position
complement(637512..640553)
Genome browser
AA seq
1013 aa
AA seq
DB search
MSTGQSPKSIGRLSFGLMNPEEYRDMSATKVITADTYDDDGFPIDMGLMDPRLGVIDPGL
ECKTCGKHSGSCNGHFGHIELAAPVIHVGFSKLIRRLLRGTCRECSRLTAVDGSKYTDGD
GNVDLEAASAAAEDKKREFKEELRRARELSNDPSDVLKSAIRQARSASRCPHCGEKQFDV
KHEKPTTYYEIIEVPHAELAERLSMAMDPPEGEPVTPDELEEATDGAFDAGRIRELLSDT
YRPDRNDIPALQEIGSALHRFNDLEEHLGDELEIESPSSYLLEEDMDKLMPSDIRDWFEE
IPDDDLEAIGVNPETSRPEWMVLTVLPVPPVTARPSITLDNGQRSEDDLTHKLVDIIRIN
QRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKE
GRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPDRVASEMTQTMNVNERNLAEARQYVA
NGPESHPGANYVRRPDGRRLKVTEKNCEELAEKVEPGWEVARHLLDGDIVIFNRQPSLHR
MSIMAHEVVVMPYKTFRLNTVVCPPYNADFDGDEMNMHALQNEEARAEARVLMRVQEQLL
SPRFGENIIGAIQDHITAVYLLTNQNPTFNETQALDLLRATNVDELPEPDGEEDGRAYWT
GRSIFSELLPDDLDLEFTSEAGDDVVIEDGQLLDGTIDDSAVGAFGGEIVDTIAKVYDKT
RARIFINEVSTLAVRTIMHFGFSIGIDDESIPPAAVEQVDEAIESAYDRVQELIETYEAG
ELESLPGRTVDETLEMKIMQTLGQARDSAGDIAEDHFASDNPAVVMADSGARGSMLNLTQ
MAGAVGQQAVRGERINRGYEDRTLSHFEANDLSAEAHGFVEHSYREGLGPKEFFFHAMGG
REGLVDTAVRTSKSGYLQRRLINALHELETQYDGTVRDSSDTVIQFEFGEDGTSPVRVSS
SEDHDVDVESIADRIVEAEFENDTEKAEFLGREERPTNLSEHADEWWHAEAGD
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaggacaatcacccaagtcgatcgggcgtctcagcttcgggctgatgaacccc
gaggagtaccgcgacatgagtgccacgaaggtcatcacggccgacacctacgacgacgac
gggttccctatcgacatggggctgatggacccccggctgggcgtgatcgaccccggtttg
gagtgtaagacctgtggcaagcacagcgggtcctgtaacggccacttcggccacatcgaa
ctcgccgcgcccgtcatccacgtcggcttttcgaaactcatccgacggctccttcgcgga
acgtgtcgagagtgttcgcgcctgaccgcggtcgacggctcgaagtacaccgacggtgac
gggaacgtcgacctggaggccgcctcggccgccgccgaggacaagaaacgcgagttcaaa
gaggaactccggcgggcacgcgaactcagcaacgacccctcggacgtcctcaagtcggcg
atccggcaggcccgttcggccagccggtgtccccactgcggggaaaagcagttcgacgtc
aaacacgagaagcccactacctactacgagatcatcgaggtcccccacgccgaactcgcc
gagcgcctcagtatggcgatggatccgccggagggcgagccagtcacgccggacgaactc
gaagaggcgacggacggcgcgttcgatgcgggtcggatccgggaactcctctcggatacc
taccgcccggaccgcaacgacatccccgcgctccaggagatcggcagcgcgctccatcgc
ttcaacgatctcgaagagcatctcggcgacgaactcgaaatcgagagtccctcgtcgtac
ctcctcgaggaggacatggacaagctgatgccctcagacattcgggactggttcgaggag
atcccggacgacgacctcgaagccatcggagtcaaccccgagacctcccggccggagtgg
atggtcctcaccgtcctgccggtgccgccggtgacggcccgtccctcgatcacgctggac
aacggccagcggtcagaggacgacctcacccacaagctggtggacatcatccggatcaac
cagcgcttcatggagaaccgtgaggccggcgcgccccagctgatcatcgaggacctctgg
gaactgctgcagtaccacgtcacaacgttcatggacaacgagatttcggggacgccgccg
gcccgccaccgttccgggcgaccgctgaagaccctctcccagcgcctgaagggtaaggag
ggacgcttccgggggagcctctccgggaagcgggtgaacttctccgcgcggacagtcatc
tcaccggaccccaccctctcgctcaacgaggtcggggtgcccgaccgggtcgccagcgag
atgacccagacgatgaacgtcaacgagcgcaatctcgcggaggcccgccagtacgtcgcc
aacggaccggagtcccatccgggggcgaactacgtccgccggccggacggtcggcgactc
aaggtgaccgagaagaactgcgaggaactcgcagagaaagtcgagccgggctgggaagtc
gcccgccatctgctcgacggcgacatcgtgatcttcaatcgccagccgagcctccaccgg
atgtccatcatggcccacgaggtcgtggtgatgccctacaagacgttccggctgaacacg
gtcgtctgtccgccgtacaacgcggacttcgacggcgacgagatgaacatgcacgccctc
cagaacgaggaggcccgtgcggaggcacgcgtcttgatgcgggttcaagaacagttgtta
tccccacgcttcggtgagaacatcatcggcgcgatccaggaccacatcaccgcggtctac
ctgttgaccaaccagaacccgacgttcaacgagacccaagcgctcgacctcctgcgggcg
acgaacgtcgacgagttgcctgaacccgatggagaagaagacggccgggcttactggaca
ggacggtcgatcttctccgaactcctgcccgacgatctggatctggagttcacgagcgaa
gcgggcgacgacgtcgtcatcgaagacggtcagttgctcgatgggacgatcgacgacagc
gcagtcggggccttcggcggcgagatcgtcgacacgatcgcgaaggtctacgacaagacg
cgagcgcggatcttcatcaacgaagtctcgacgctcgcggtccggacgatcatgcacttc
gggttctcgatcgggatcgacgacgagtcgatcccaccggcggctgtcgagcaggtcgac
gaagccatcgagagtgcgtacgaccgcgtccaggaactcatcgagacctacgaggccggc
gaactcgaatcgctccccggtcggacggtcgacgagaccttagagatgaagatcatgcag
accctcggccaggcgcgtgacagcgcgggtgacatcgccgaggatcacttcgcgtcggac
aacccggcagtcgtgatggccgactccggggcgcgtgggtcgatgctcaacctgacccag
atggccggggcagtcggccagcaggcagtccggggcgagcggatcaaccgtggctacgag
gaccggacgctcagccacttcgaggccaacgacctctcggcggaggcccacgggttcgtc
gagcactcctaccgcgagggcctcggtccgaaggagttcttcttccacgcgatgggtggc
cgcgaggggctggtcgacacggcagtccggacctccaagtccggatacctccagcgtcgg
ctgatcaacgccctccacgagctcgagacccagtacgacgggacggtccgggattccagc
gacactgtcattcagttcgagttcggtgaagacgggacctcccccgttcgggtctcatcc
agcgaggatcacgatgtcgacgtcgagtcgatcgccgatcgtatcgtcgaagccgaattc
gagaacgacacggagaaagcggagttcctcggccgggaggaacggccgacgaacctctcc
gaacacgccgacgagtggtggcacgcggaggccggagactga
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