Halorhabdus tiamatea: HTIA_0784
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Entry
HTIA_0784 CDS
T02781
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hti
Halorhabdus tiamatea
Pathway
hti03410
Base excision repair
hti03430
Mismatch repair
hti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HTIA_0784 (recJ)
03430 Mismatch repair
HTIA_0784 (recJ)
03440 Homologous recombination
HTIA_0784 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hti03400
]
HTIA_0784 (recJ)
DNA repair and recombination proteins [BR:
hti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HTIA_0784 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HTIA_0784 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HTIA_0784 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
CCQ32924
UniProt:
S6CSQ0
LinkDB
All DBs
Position
746389..747789
Genome browser
AA seq
466 aa
AA seq
DB search
MPKLADRAAECAERLRAAEEVLLASHIDADGLTSAGIAATALERAGIPTTTVFKNQLDDE
EIASIAARDVQTVLFTDFGSGQLDAITKHEQRGDFEPIVVDHHQPADAETRYHLNPLLEG
IDGASELSGAGASYLLARALEGDEQDNRDLAALAVVGAVGDMQAVGGELVGANRAIVADG
MDAGVLEEATDLALYGKQTRPLPKLLEYADQPQIPGVSGDEAGAIDFLESLGIELETEGE
WRRWVDLAAAERQTVVSGLVQRGVERGVPADRIESLVGTTYTLSAETQGTELRDASEFST
LLNATARYERADVGLAVCLGDREEALERARRLLANHRRNLSEGLEYVRENGVESGEHVQW
FDADDAIRETIVGIVAGMALGLPGVERDRPIVAFARKSEDERKVSARGTATLVRQGLDLS
SAIHAASVAVGGDGGGHDIAAGATIPTDRREEFIDRLESAITEQLT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaaactcgccgatcgagccgcggagtgtgccgagcgccttcgagcggccgaggag
gtgctcctggcctcgcacatcgacgccgacgggttgacgagtgccgggatcgccgcgacg
gccctcgaacgcgcggggattccgacgacgaccgtcttcaagaaccagctcgacgacgag
gagatcgcctcgatcgcggcgcgagacgtccagaccgtgttgttcaccgacttcggcagt
ggccaactcgacgcgatcacgaagcacgaacagcggggtgacttcgagccgatcgtggtg
gatcaccaccagccggccgacgccgagacgcgctatcacctcaatccgctactcgaaggg
atcgacggcgcgtccgagctctcgggggctggggctagttatctactcgcacgcgcgttg
gaaggtgacgaacaggacaatcgggacctcgcggcgctcgccgtggtcggtgccgtcggg
gacatgcaggcagtcggcggtgaactcgtcggcgcgaaccgggcgatagtcgcggacggc
atggacgcgggcgtgctcgaagaggcgaccgaccttgccctgtacggcaaacagacccgg
ccgctgccgaaactcctcgaatacgcggatcaaccccagattcccggggtttcaggcgac
gaagccggcgcgatcgacttcctggaatcgctcgggatcgaactcgaaacggaaggcgag
tggcgtcgatgggtcgatctcgccgccgcagagcgccagacagtcgtcagcgggctcgtc
cagcgcggtgtcgaacgtggcgtcccggccgaccggatcgagtcgctcgtcggcacgacc
tacacactctcagcagagacgcagggcacggaactccgggacgcgagcgagttctcgacg
ctgctcaacgcgacagcgcggtacgaacgggccgacgtgggtctcgccgtctgtctcggc
gatcgcgaggaggccttagaacgcgcccgtcgattgctcgcgaaccaccgacggaatctt
tcggagggcctcgaatatgtccgggaaaatggcgtcgagtcgggcgagcacgtccagtgg
ttcgatgccgacgacgccatccgggagacgatcgtcgggatcgtggccgggatggcgctc
ggcctccccggggttgagcgcgaccgaccgatcgtcgccttcgcccggaagtccgaggac
gagcgaaaggtctcagctcgtgggaccgccacgctcgtccgccaggggctggatctctcg
agtgcgatccacgcggccagtgtcgctgtcggtggtgacggcggcggccacgatatcgct
gcgggcgcgacgatcccgacggatcgccgagaggagttcatcgaccggctcgagagcgct
atcaccgagcaactgacctga
DBGET
integrated database retrieval system
