Halorhabdus tiamatea: HTIA_0881
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Entry
HTIA_0881 CDS
T02781
Name
(GenBank) DNA mismatch repair protein, MutS family
KO
K07456
DNA mismatch repair protein MutS2
Organism
hti
Halorhabdus tiamatea
Pathway
hti03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HTIA_0881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hti03400
]
HTIA_0881
DNA repair and recombination proteins [BR:
hti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HTIA_0881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
HHH_5
HHH
IMS_HHH
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CCQ33021
UniProt:
F7PJ55
LinkDB
All DBs
Position
complement(842878..844863)
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AA seq
661 aa
AA seq
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MDLTAIPGVGAKTADALAELEAPEAAIESGDVAAVARAPGISQGRAARIVRAAIRQRHDD
EGTFLATPRAREVYRDVLDLLADRTVTDYAAARLETFYPSASESRIDEVRALSERAMERD
PDDAVLAALEDVEPLEVPGDVRVRDRCLATTDGETYASAREAIPELSVEVVEDSRDLAEL
ARGYATVVALDDSFAGVDVEGDVRVEPDALAEPAAVVPERPLAFFAHNRDRILAAITVHR
AADLDAPCDLDVLEAALDRLDAEGTPTGDDELRRLQTAVDDLDAAVGEAESVANDRLREA
IEAQDVTIEGADLLSLVERGAGVDEVLSRELADEYDDAVEAAREHVIDTLDLRDVADIAR
RAFPDEPTFPVEREESVVSRLREELTTARDRRAERLKTELADDLASMREPAETLVDAALE
LDVELAIARFAADFDATMPELGGDGITIEGGRSPLLDVEFGDVEPVDYDVSGVRLLSGVN
SGGKTSMLDLIALTVILAHMGLPVPADRVHVGRIDALHYHAKTQGTLDAGAFESTLRSFG
ELVTDAASEGETLVLVDELESITEPGASAKIMAGILEALGARDQTAVFVSHLAREIRETA
DREIGVDGIQALGLEDGKLQVDRTPRKDTLARSTPELIVEKLADGNDGDAGFYADLLAKF
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggatttgacggcgatccccggcgtcggcgcgaagactgccgacgctctcgccgagctc
gaggcccccgaagccgcgatcgaatcgggcgacgtcgccgccgtcgcgcgggctcccggc
atcagtcagggccgggccgcccggatcgtccgcgcggcgatcaggcagcgccacgacgac
gagggaaccttcctcgcgacgccgcgcgcccgggaagtgtaccgggacgtcctcgacctc
ctggcggaccgcaccgtcaccgactacgcggccgccagactggagacgttctatcccagc
gccagcgaatcccggatcgacgaggtccgtgctctgagtgaacgcgcgatggagcgcgac
cccgacgacgccgtcctcgccgcgctcgaagacgtcgaaccactcgaagtgccaggtgac
gtccgggtccgggaccggtgtctcgcgacgactgacggcgagacctatgccagcgcccgg
gaggcgatccccgagttgagcgtcgaagtcgtcgaggacagccgcgacctggcggaactc
gcccgcggctacgcgaccgtggtggcgctcgatgactccttcgccggcgtcgacgtcgag
ggtgacgtccgcgtcgaacccgacgcgctcgcggaaccggccgcagtcgtccccgaacgc
ccgctcgccttcttcgcccacaaccgcgaccgcatccttgccgcgatcaccgtccaccgg
gcggccgatctcgacgcaccctgtgatctcgacgtgctcgaagccgcgctggatcgactc
gacgcggaagggacgccgaccggcgacgacgaactccggcggcttcagacggctgtcgac
gacctcgatgccgccgtgggcgaggccgaatcggtcgctaacgaccgccttcgggaggcg
atcgaggcccaggacgtcaccatcgagggggcggacctgctctcgctcgtcgagcgcggc
gctggcgtcgacgaggtgctttcgagggaactggccgacgagtacgacgacgccgtcgaa
gcggcccgcgaacacgtcatcgacacactggatctccgggacgtcgctgacatcgcccgg
cgtgccttcccggacgagcctacgttccccgtcgagcgcgaggagagcgtcgtctcgcga
ctccgggaggaactcacgacggcccgcgaccggcgagccgagcgcctcaagaccgaactc
gccgacgacctggcgtcgatgcgcgagcccgcggagactctcgtcgatgccgccctggaa
ctggacgtcgaactcgcgatcgcccgcttcgctgccgatttcgacgcgacgatgcccgaa
ctcggcggcgacggaatcacgatcgagggcggccgctcgccgttgctcgacgtcgagttc
ggtgacgtcgagccggtcgactacgatgtctccggcgtcaggctcctctcgggggtcaac
agcggtgggaagacctccatgctggatctgatcgccctgaccgtgatcctcgcccacatg
ggtttgccggtgcccgcagaccgggtgcacgtcgggcggatcgacgccctgcactaccac
gccaagacccaggggacgctcgacgcgggggccttcgagagcacgctacgctcctttggc
gaactggtcaccgatgccgcgagcgagggcgagacgctcgtgctggtcgacgagttagag
agcatcaccgaacccggcgcgagcgcgaagatcatggccgggattctggaggcactcgga
gcacgcgaccagacggccgtgttcgtctctcacctcgcccgggagatccgggagacggcc
gatcgggaaatcggcgtcgacggcatccaggcgctcgggctcgaagacggcaagctacag
gtcgatcgaacaccgaggaaggacacgctggcccgctcgacaccggaacttatcgtcgag
aaacttgcggacggtaacgacggtgacgccgggttttacgccgatctgctcgcgaagttc
gagtga
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