Halorhabdus tiamatea: HTIA_0908
Help
Entry
HTIA_0908 CDS
T02781
Name
(GenBank) archaeal sugar-specific transcriptional regulator, TrmB family
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hti
Halorhabdus tiamatea
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hti03000
]
HTIA_0908
Transcription factors [BR:
hti03000
]
Prokaryotic type
Helix-turn-helix
Other families
HTIA_0908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
HTH_5
PadR
HTH_IclR
MarR_2
PPE
HTH_24
Rrf2
MarR
HTH_Crp_2
DUF2250
HTH_Cmi2_C
DUF3080
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
CCQ33047
UniProt:
S6CTL4
LinkDB
All DBs
Position
complement(873514..874578)
Genome browser
AA seq
354 aa
AA seq
DB search
MNESELTSILEEAGFSPYQADAYVALLELGSATATDLAEESDVPDPRIYDVLRDLEKAGY
VETYEQDSLRARVHDFEALQESLDDRATRFSRAVDEIERRWEKPRMEESVVNVVTRFETV
LESAAEAIENAENQIQLTVNPDTFEVLRPALRAATDNGVAVNLAITTDGESESVPDPETV
ADVCTEARHRELSSPFVAIVDRKKAYFAPHEGSTNEYGLIVDDQTHAYVFYWFFLTTQWD
NWEPVVAAEDDTQEYLEIRYCIRDIAPLIDDGKTVRLRVDGADTETGDRRVIEGTVKDVI
VGPDHVNLETTPISSYGNRVAIVLETDDGTVDVGGWGALVEDVEAHRIVVESVE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagtcggaactcacttcgatcctcgaggaggcgggcttctcgccgtaccaggcc
gacgcctacgtcgcgttgctcgaactcgggtcggcgaccgcgaccgacctcgcggaggag
agcgacgtccccgacccccggatctacgacgtgttgcgcgacctcgagaaagcgggctac
gtcgagacctacgagcaggattccctccgggcgcgtgtccacgacttcgaggcgctccag
gagagtttagacgaccgtgcgacccgcttttcgcgggccgtcgatgagatcgaacgccgc
tgggagaaaccccggatggaggagagcgtcgtcaacgtcgtcacgcgcttcgagacggtc
ctggagagtgcggccgaggcgatcgagaacgccgaaaaccagatccagctcaccgtcaat
cccgacaccttcgaggtgctgcggccggcgctgcgagcggcgacggacaacggcgtggcc
gtcaatctcgcgatcaccaccgacggcgagtctgaatcggtcccggaccccgagacggtc
gccgacgtctgtaccgaggcgcgtcaccgggaactctcctcgccgttcgtggcgatcgtc
gaccggaagaaggcctacttcgcgccccacgagggttcgaccaacgagtacggcctcatc
gtcgacgaccagactcacgcctacgtcttctactggttcttcctgacgacgcagtgggac
aactgggagccggtcgtcgccgccgaggacgacacccaggagtacttagagatccggtac
tgcatccgcgacatcgcgccgctgatcgacgacggcaagacggttcggcttcgcgtcgac
ggggccgacaccgagacgggcgatcggcgcgtcatcgaggggacggtcaaggacgtcatc
gtgggtcccgatcacgtcaacctcgagacgacgccgatcagttcctacggtaatcgcgtc
gcgatcgtcctcgaaaccgacgatggcacggtcgacgtcggcggctggggcgcactcgtc
gaggacgtcgaggcccatcggatcgtcgtcgagtccgtcgagtga
DBGET
integrated database retrieval system
