Halorhabdus tiamatea: HTIA_1061
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Entry
HTIA_1061 CDS
T02781
Name
(GenBank) archaeal sugar-specific transcriptional regulator, TrmB family
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hti
Halorhabdus tiamatea
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hti03000
]
HTIA_1061
Transcription factors [BR:
hti03000
]
Prokaryotic type
Helix-turn-helix
Other families
HTIA_1061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
MarR_2
HTH_24
HTH_20
UPF0122
HTH_Cmi2_C
DUF6139
HTH_28
Phage_TAC_12
wHTH-PRTase_assc
Motif
Other DBs
NCBI-ProteinID:
CCQ33199
UniProt:
S6CSZ8
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Position
1043703..1046033
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AA seq
776 aa
AA seq
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MHGLSHSQTSSSKTIRRLMLHHADNYVMSDPKSDWDILPQEILEENAGMSPYEASVYLAL
IRGGKQSMSELSDASEVPRQRIYDIVKRLRERGFVEIIDEYPKQAYPVDPEKALSPIQDR
IRRTRNFLEDLHQAVDEVEEGVSLFKSEASIRKYIRRIITTADMDLFLTIPHHALDMFRE
DLSELPSDVRTKLIISEIDPEISDGDSIVLDNDVTELADEVRGVTSSEPFIVCADRKTGF
YWPELISTQPTQEQGFYITNPELGLLLDRFLSDLLWPIAQPVNPSQNTSELPTFPAQYIR
VRDCLADLKQVTADRALESFEIEFEGYDTDTGEAVTKRGILSGYYFSEFDVRASFTLDTV
DEPATNERESVSVGGWKAIQEDYEAVRLTVYEREHRELYSLDTETRNYVKACREELPNSF
GDRHAVIGIDTTVDRMREIVVEQLEPGKYRPMEEYASFRESIIEFEAEDSPPGMMWAQTE
TTPGGITGHMGEVFNQLDYSLAFVGNFGKPIHPVFKTAYQGQTIFSIGSPTYADYVQFDD
GKFILADLPPTNIDWETIRNTLSLDRIAEQVDGAEFIALGTWGHFNSLPTIWDGIRMDLW
PRLEDPPEKALVLPGDIQDVPDSEIENGLESIRNLSDILDVTIVTNRTQADSFSNEIDGG
EAAMSLSDMATILQDAMEVSKFVVHAPLEAALGNGEEVLTACAPRPRSVQITNVDDHFNT
GLALGMTEGLTDEASLVLAHAVAGVFMREREPPTEKQIRSFVAEYDRLFDSQKDTK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
gtgcatggattaagccactctcagacatcttcaagcaagacaatcagaagattgatgcta
caccatgctgataattatgtaatgtccgatccgaagagtgattgggatatccttccacag
gaaatactcgaagagaacgcggggatgtcaccttacgaagcgagcgtgtatctggcgctt
attcgtggtgggaaacagtcgatgagcgaactgtccgacgcgagtgaggttcctcgacaa
cgaatctacgatatcgtcaaaagactccgtgaacgtggattcgtcgaaataatcgacgag
tatccgaagcaagcgtatccagtcgatccggaaaaagcgctgtctccgattcaagatcgc
attcgtcgtactcgcaacttcctcgaggatctccatcaagcggttgacgaggttgaagag
ggtgtttcactcttcaagagcgaagcgagtattcgaaagtacatccgtcggataatcacg
acagccgatatggacctctttcttacaatccctcaccacgcactcgacatgttccgtgag
gacctgagcgagctaccttcggacgtgcggacgaaattgatcatctctgaaatcgaccct
gaaatctctgacggcgactccattgttctcgacaacgacgttactgaactcgccgatgaa
gttcgtggcgtcacgtcatcggaaccgtttattgtctgtgccgaccgaaagaccggcttc
tactggccggaactcatcagtacgcaaccgacccaagagcaaggattctacatcacaaat
cccgaactcggactgttgcttgatcggttcctctcggacttactttggccgattgcccaa
ccagtgaatccatcgcagaacacttcggaactgcctacgtttccagcacaatacattcgg
gtacgtgactgtcttgcggatctcaagcaggtcactgccgatcgagcactcgaatcgttc
gaaatcgagttcgagggctacgatactgataccggtgaagcagtcacaaagcgaggcata
ttgagcgggtactatttcagcgaattcgacgttcgggcttcgtttacactcgacaccgta
gatgaaccagccaccaacgaacgggaatccgtctcagtgggagggtggaaagcgatacaa
gaggactacgaagcagtacgactcaccgtctacgaacgcgagcacagagagctgtactcg
ctcgacacagaaacgcgcaactacgtcaaggcctgtcgcgaagaacttccaaactcattc
ggcgatcgtcacgcagtaatcgggatcgacaccactgtcgaccgaatgcgagagatcgtt
gtggagcaactagagccggggaaatatcgaccgatggaagaatacgcttcgttccgtgag
tcgatcatcgaattcgaagcggaagatagtccgccgggaatgatgtgggcacagactgag
acaacccccggggggataactggacacatgggggaagtattcaatcaacttgactattca
ctcgccttcgtcggaaacttcggcaagccaattcatccagttttcaaaactgcctatcaa
ggtcagactatcttcagtattggtagtcctacgtacgccgactacgttcaatttgacgat
gggaaatttattctcgccgatcttccgccgaccaacattgactgggaaaccattaggaat
acgcttagcctcgatcggattgctgaacaggtagacggagcggagttcattgctctcggg
acgtgggggcatttcaattcgctaccgactatttgggacggaatacgaatggatttgtgg
cctcggctagaggacccgccagagaaagcactcgtattaccgggagacattcaagacgtt
cctgactccgaaatcgaaaacgggctcgaatctattagaaacctaagtgatatattggac
gtaaccatagtgacgaatagaacccaagctgatagtttttcaaacgaaatcgacggcgga
gaggcggctatgtccttgagcgacatggcgacgattcttcaggacgcgatggaagtttcg
aagttcgtcgtacacgccccgctggaagcagcactcggaaacggggaggaagttctgacg
gcgtgtgctccccgcccgagatcagtacagatcacgaacgtcgacgaccactttaacact
ggcctggcactgggaatgacggaaggactcactgatgaggcatcgctcgttctcgcgcac
gccgttgccggagtcttcatgcgggaacgtgaaccgccgacggagaaacagatccggtcg
tttgtggccgaatatgatcggctattcgactcacagaaagatacaaaatag
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