Halorhabdus tiamatea: HTIA_1108
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Entry
HTIA_1108 CDS
T02781
Name
(GenBank) transcription factor TFIIB cyclin-related protein
KO
K03124
transcription initiation factor TFIIB
Organism
hti
Halorhabdus tiamatea
Pathway
hti03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HTIA_1108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hti03021
]
HTIA_1108
Transcription machinery [BR:
hti03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HTIA_1108
Prokaryotic type
Archaeal type
TFB
HTIA_1108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
A2L_zn_ribbon
Zn_ribbon_3
Anti-TRAP
DZR
Trm112p
Zn_ribbon_Nudix
Zn_ribbon_RPB9
Auto_anti-p27
HTH_Tnp_ISL3
Zn_ribbon_LysW
Zn_ribbon_PaaD
DUF5795
Motif
Other DBs
NCBI-ProteinID:
CCQ33246
UniProt:
F7PQB7
LinkDB
All DBs
Position
complement(1096354..1097331)
Genome browser
AA seq
325 aa
AA seq
DB search
MSETNTRTRLDQSTTVNEDETETEAEDVNCPECGGNLISDTERGETVCTECGLVVEEDEI
DPGPEWRAFDAKEKDQKSRVGAPTTNMMHDKGLSTNIDWRDKDAYGNSLGSRQREKMQRL
RKWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPGRSIE
GVSTASVYAAARQAGVPRSLDELTDVSRVEKDEIARTYRYVVRELGLEVRPADPESYVPR
FTSDLELSEEAERRARELLANAKEEGVHSGKSPVGLAAAAIYAASLLTNEKTTQAAVSEV
ADISEVTIRNRYHELLEAEQSIPAA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacaaacaccagaacccgactcgaccagtcgacgacagtcaacgaagacgaa
accgagaccgaggccgaggacgtcaactgcccggagtgtggtggcaacctcatctccgac
accgagcgcggtgagaccgtctgtacggagtgtggactcgtcgtcgaggaagacgagatc
gaccccggaccggagtggcgagccttcgacgccaaggagaaagaccagaagtcccgcgtc
ggcgcgccgacgacgaacatgatgcacgacaaggggctgtcgaccaacatcgactggcgc
gataaggacgcctacggcaactcgcttggctcccgccagcgcgagaagatgcagcgcctc
cggaagtggaacgagcgcttccggacgcgtgactccaaggaacgcaatctcaagcaggcc
ctcggtgagatcgaccggatggcgagcgcgcttggcctccccgagaacgttcgtgagacc
gccagcgtcatctatcgccgcgcgctcgacgaggacctcctgcccggccgctcgatcgag
ggcgtctcgacggcctcggtctacgccgccgcccgccaggccggcgtcccgcggagcctc
gacgaactcaccgacgtctctcgggtcgagaaagacgagatcgcccggacgtatcggtac
gtcgtccgcgaactcggtctggaagtccgacccgcagaccccgagagctacgtcccacgg
ttcacctcggacctcgaactgagcgaggaggcagagcgtcgcgcgcgtgaactgcttgcc
aacgccaaagaggagggcgtccactccgggaagagccccgtcggcctcgccgctgcggcg
atctacgccgcctcgctgctcaccaacgagaagaccacccaggccgccgtctcggaagtg
gccgacatctccgaggtcacgatccgcaaccggtatcacgaactcctcgaggccgagcag
tcgatccccgcagcctga
DBGET
integrated database retrieval system
