Halorhabdus tiamatea: HTIA_1152
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Entry
HTIA_1152 CDS
T02781
Name
(GenBank) transcription factor TFIID
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hti
Halorhabdus tiamatea
Pathway
hti03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HTIA_1152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hti03000
]
HTIA_1152
03021 Transcription machinery [BR:
hti03021
]
HTIA_1152
Transcription factors [BR:
hti03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
HTIA_1152
Transcription machinery [BR:
hti03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
HTIA_1152
RNA polymerase III system
TFIIIB
HTIA_1152
RNA polymerase I system
SL1/TIF-1B
HTIA_1152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
T4bSS_IcmS
Motif
Other DBs
NCBI-ProteinID:
CCQ33290
UniProt:
F7PQF6
LinkDB
All DBs
Position
1139996..1140556
Genome browser
AA seq
186 aa
AA seq
DB search
MVDPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFR
SGKIVCTGAKSTDDVHESLQIVFGKLRDLNIQVDEDPEIVVQNIVTSADLGRNLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKEPDDAKKAVDKIVSRLE
ELGLLE
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggttgaccccaaggaaacaatcaacatcgaaaacgtcgtcgcctcgaccggcatcggc
caggagctcgatctccagagcgtggcgatggacctcgaaggggccgattacgatcccgag
cagttccccggcctcgtctatcggacccaggaacccaagtcggcggcactgatcttccgg
tcgggcaagatcgtctgcaccggcgcaaagagcaccgacgacgtccacgagagtctccag
attgtcttcgggaagctccgggacctgaacatccaggtcgacgaggaccccgagatcgtc
gtccagaacatcgtgacctccgcggacctcggtcggaatctcaacctgaacgcgatcgcg
atcggactgggtctggagaacatcgagtacgaacccgagcagttccccggcctcgtctac
cggctggacgatcccgacgtcgtcgcgctgctgtttggctccggaaaactcgtcatcacc
ggcggcaaggaacccgacgacgccaagaaggccgtcgacaagatcgtctcccggctcgag
gaactcggcctgctcgaataa
DBGET
integrated database retrieval system
