Halorhabdus tiamatea: HTIA_1389
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Entry
HTIA_1389 CDS
T02781
Name
(GenBank) DNA topoisomerase type IA Zn finger domain protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hti
Halorhabdus tiamatea
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hti03032
]
HTIA_1389
03400 DNA repair and recombination proteins [BR:
hti03400
]
HTIA_1389
Enzymes [BR:
hti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HTIA_1389
DNA replication proteins [BR:
hti03032
]
Prokaryotic type
DNA Topoisomerases
HTIA_1389
DNA repair and recombination proteins [BR:
hti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HTIA_1389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NucS_N
Zn_ribbon_Top1
Zn_ribbon_6
Auto_anti-p27
HMBD
zf_Rg
zf-C3H1
Motif
Other DBs
NCBI-ProteinID:
CCQ33517
UniProt:
F7PKA0
LinkDB
All DBs
Position
complement(1370796..1371551)
Genome browser
AA seq
251 aa
AA seq
DB search
MHDGIHVVAGECTTTFDGSRVREHEQRGQVLVVVKPDNTVLVHDAEGYQPVAWLTRAETV
TIDGTHLAATDGDQRLTVDIHDETASGRYPASAAGSPVGECPDCGAALVRVTDAVACTGC
DARYGLPGDAEVLDHRCECGLPKMHVERGRAFEICVDRECESMDDAVAEVFDREWDCPNC
DGDLRILRRGGLLAGCENYPECDTGFAFPAGVVVGECACGLPLFETAGGRRCLDATCEAW
RDDSGGLPAES
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacggaatccacgtcgtcgcgggagagtgtacgaccaccttcgacggctcgcgc
gtccgcgagcacgaacagcgcgggcaggtcctcgtggtggtcaaaccggacaacacggtc
ctggttcacgacgccgagggctaccagccggtcgcgtggctcacgcgcgccgagacggtg
accatcgacggcacacacctcgcggcgaccgacggcgaccagcgactcactgtcgatatc
cacgacgagaccgcgagcgggcgctacccggccagcgccgcgggatcgccggtcggcgag
tgtccggactgcggggccgcactcgtccgcgttaccgacgccgtcgcctgtacgggctgt
gacgcccgatacggactgcccggcgacgcggaagtgctcgaccatcgctgtgagtgtggc
ctcccgaagatgcacgtcgagcgcggccgggccttcgagatctgtgtcgatcgcgagtgt
gagtccatggacgacgccgtcgccgaggtcttcgaccgcgagtgggactgtccgaactgc
gacggtgacctccggatcctccggcgcggcggtctgctcgcgggctgtgagaactacccc
gagtgtgacaccggcttcgcgttcccggccggcgtggtcgtgggcgagtgtgcctgtggc
cttccgctgttcgagaccgctggcgggcgacgatgtctcgacgcgacctgtgaggcctgg
cgggacgactcggggggccttccggcggagtcgtga
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integrated database retrieval system
