Halorhabdus tiamatea: HTIA_1597
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Entry
HTIA_1597 CDS
T02781
Name
(GenBank) universal stress protein A (UpsA) domain protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hti
Halorhabdus tiamatea
Pathway
hti03420
Nucleotide excision repair
hti03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HTIA_1597
03430 Mismatch repair
HTIA_1597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hti03400
]
HTIA_1597
Enzymes [BR:
hti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HTIA_1597
DNA repair and recombination proteins [BR:
hti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HTIA_1597
MMR (mismatch excision repair)
Other MMR factors
HTIA_1597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
AAA_11
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
CCQ33724
UniProt:
F7PR30
LinkDB
All DBs
Position
1596918..1598759
Genome browser
AA seq
613 aa
AA seq
DB search
MTESTAQVTRLFGGPGSGKTTALLDRVEELLEDDDVDVRDILVVSYTRAAAAEVRERLAD
RLDVSPRSLKGNVCTMHAKAYELLNLSRGDVVGESDKQEFAEEYGIEYEDQYEGGRRRTA
RSTTIGNKIIATSQWLQRTSRDVADWYDVPFKWNDEKVRLPPEIDENAQTGNKYTPTWPS
DDDRIDVPEVIRAWRAYKGEHGLVGFADMLERVKQRSLLPSVDYLAIDEFQDITTLQYDV
YEEWKAHVDRALIAGDDDQVVYAWQGADPNLLLEEEGEDVILDTSHRLPSKILEVVQREV
THIDQRQEKNLSPRKQGGNVEAVRNPSMLDLVRNVRGTVEEDDGTVMVLFRARYQMFQFI
DEFIDEGIPFRTMTDQRMWTDRLTDYVNGIEALAADEPLTALQGRRLADMLEDTAFGTGE
RDDLFDDLEDRQEAADTDDLTEIEIEPDLIRDHAPFLPEPPAAADMVRKVTSFQEQTIDA
YFAGDYEGMDPGRVRLGTIHSAKGREADHVFVATDLTEKVVEQMAATVERNGIDVPGIDE
FTKHTDPVPTLTDNERRVFYVGLSRARERLVVLENLVSGAPTLPIDVLLHNEPSEDPEAA
LASILGEEAAAVH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatcgacggcccaggtgacccgcctgttcggcgggcctggcagcgggaagacg
acggcgttactcgaccgggtcgaggaactcttagaagacgacgacgtagacgtccgggac
atcctcgtcgtctcgtatacgcgagcggccgccgcggaggttcgtgaacgactcgccgac
cgactcgacgtctcgccgcgctcgctgaaggggaacgtctgtacgatgcacgccaaagcc
tacgagctgttgaacctctcgcggggggacgtcgtgggcgagtcagacaaacaggagttc
gccgaggagtacggcatcgagtacgaggaccagtacgagggtggccgacggcggaccgcg
cgctcgacgacgatcggcaacaagatcatcgccacgagccagtggctccagcggaccagt
cgcgacgtcgccgactggtacgacgtccccttcaagtggaacgacgagaaggtccgcctg
ccgcccgagatcgacgagaacgcccagacgggcaacaagtacacgccgacgtggcccagc
gacgacgatcggatcgacgtcccggaggtcatccgcgcctggcgagcgtacaagggtgaa
cacggcctcgtcgggttcgccgacatgctcgaacgcgtcaagcagcgctcgctgctgccc
agcgtcgattacctcgcgatcgacgagttccaggacatcacgacgctgcagtacgacgtc
tacgaggaatggaaggcccacgtcgatcgcgcgctcatcgcgggcgacgacgaccaggtc
gtctacgcctggcagggggccgaccccaacctgctcttagaggaggagggcgaggacgtc
atcctcgatacctcccatcggctcccctcgaagatcctcgaggtcgtccagcgcgaggtc
acccacatcgatcagcgccaggagaagaacctctcgccgcgcaagcaggggggcaacgtc
gaggccgttcggaacccctcgatgctcgatctcgtccggaacgtccgtgggaccgtcgag
gaggacgacggcaccgtcatggtgttgttccgggcgcgctaccagatgttccagttcatc
gacgagtttatcgacgagggcatccccttccggacgatgaccgatcagcggatgtggacc
gaccgcctcactgattacgtcaacgggatcgaggcgctcgcggcggacgaaccgttgacg
gccttgcagggccgtcgtctggcggacatgctcgaagacacggccttcgggaccggcgag
cgtgacgacctcttcgacgacctcgaagaccgccaggaagcagccgacacggacgacctc
accgagatcgagatcgagcctgatctcatccgcgaccacgccccgttcctcccggaaccg
ccggccgccgccgacatggtccggaaggtcaccagctttcaggaacagaccatcgacgcg
tacttcgccggcgactacgagggcatggaccccgggcgcgttcgcctcggcaccatccac
agcgcgaaggggcgggaggccgatcacgtcttcgtcgcgaccgacctcaccgagaaggtc
gtcgagcagatggccgcgaccgtcgagcgcaacgggatcgacgtccccggcatcgacgag
ttcaccaaacacacggatccggtgccgacgctgaccgacaacgagcgccgggtcttctac
gtcggactctctcgcgcccgcgagcgactcgtcgtcctcgaaaacctcgtcagcggcgcg
ccgacgctgcccatcgacgtcctgttgcacaacgagcccagcgaggaccccgaggcggcg
ctcgcgtcgatcctcggcgaggaagctgcggccgtccactga
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