Halorhabdus tiamatea: HTIA_1625
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Entry
HTIA_1625 CDS
T02781
Name
(GenBank) DEAD_2 domain helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hti
Halorhabdus tiamatea
Pathway
hti03022
Basal transcription factors
hti03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HTIA_1625
09124 Replication and repair
03420 Nucleotide excision repair
HTIA_1625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hti03021
]
HTIA_1625
03036 Chromosome and associated proteins [BR:
hti03036
]
HTIA_1625
03400 DNA repair and recombination proteins [BR:
hti03400
]
HTIA_1625
Enzymes [BR:
hti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HTIA_1625
Transcription machinery [BR:
hti03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HTIA_1625
Chromosome and associated proteins [BR:
hti03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HTIA_1625
DNA repair and recombination proteins [BR:
hti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HTIA_1625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ATPase
SLFN-g3_helicase
AAA_34
AAA_25
AAA_16
SecA_DEAD
CPT
Sigma54_activat
nSTAND3
HBB
PhoH
DUF1441
Motif
Other DBs
NCBI-ProteinID:
CCQ33752
UniProt:
F7PNL2
LinkDB
All DBs
Position
complement(1624240..1626408)
Genome browser
AA seq
722 aa
AA seq
DB search
MASDPDYARFFPYDEPYDHQREAIEGIGDALDEGSDVLLEGATGTGKTLAALTPALEFAR
RTEKTVVITTNVHQQMRQFVEDARAITRQEPIRAAVFRGKGSMCHIDVGYEECQALRETT
RDLVDSEAEQADLERRQRELLDASQEGDSEAAEARSAVMDELESVAEEVETLKEEQATCD
HYYRNLTTDTDEFYAWLYDDVRTPDQVYEYAERQGLCGYELLKEGIDGVDLVICNYHHLL
DPFIREQFFRWLGRDPEDVIAVFDEAHNVEDAAREHARRTLAEPTLERALEELEDVDDPR
AGPAGNVLETILTALRETYDDALGFGERETVDEEWTDLAIDNDDRRDDLTLSILQNYTGQ
GVHEDLEAAVALGQALDQQYEDAYKDGETSVRKECPTLQAATFFDGWFEDGEQTGLYPVV
SVRREEGNGDLYGRAELYTAIPERVTRTLFDDLYASVLMSATLRPFDVTEAVLGLEDPET
MAYGPQFPEERRRTYAVDVPSLFSSRRDDPELQDTVASVVEDTVRLTPGNTLAFFPSYSE
AERYHDAVDVEATKYLDEPGTRAQELRETFTDGDDGVLFTSLWGTLGEGVSYDGDDARTV
LVVGVPYPYLDDRMDAVQDAYDATFDAEEAGWRYAVEIPTIRKTRQAMGRVVRSPADFGA
RVLVDRRYTEKAEIESPEYAVRGTFPPVERGEMIDVEPEKLKFGLLNFYADMDAYDGEPP
EP
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
gtggcgtccgacccggactacgcgcggttctttccctacgacgagccatacgaccaccag
cgcgaggccatcgaggggatcggcgacgccttagatgaggggtcggacgtcttgctggag
ggcgcaacggggacgggcaagaccctcgcggccctgacgccggccctggagttcgcccgc
cggacggagaagaccgtcgtgatcacgaccaacgtccaccagcagatgcgccagttcgtc
gaagatgcgcgggcgatcactcgccaggaacccatccgcgcggccgtcttccgcgggaaa
gggtcgatgtgtcacatcgacgtgggctacgaggaatgccaggcgttgcgggagacgacc
cgcgatctcgtcgacagcgaggccgaacaggcagacctcgagcgtcgccagcgagaactc
ctggacgcgagtcaagaaggggacagcgaggctgccgaagcacgctcagcggtcatggac
gaactggagtcggtcgccgaggaggtggagacgctcaaagaggagcaggcgacctgcgac
cactactatcggaatctcacgaccgataccgacgagttctacgcgtggctgtacgacgac
gttcggacgcccgatcaggtctacgagtacgccgaacgccagggactctgtgggtacgag
ctcctgaaagaggggatcgacggcgtcgatctggtcatctgtaactaccatcacctgctg
gatccgttcatccgcgagcagttcttccggtggctcggccgtgaccccgaggacgtgatc
gcggtcttcgacgaggcccacaacgtcgaggatgcggcccgcgaacacgcccgtcggacg
ctggctgagccgacgctcgaacgcgcactcgaggaactcgaagacgtggacgacccccgc
gccggcccggcgggcaacgtcctcgaaacgatcctgaccgccctccgggagacgtacgat
gacgcactcgggttcggcgagcgcgagaccgtcgacgaggaatggactgacctcgcaatc
gacaacgacgaccgacgagacgacctcacgctttcgatcctgcaaaattacaccggccag
ggcgtccacgaggatctggaggcggccgtcgcgctcgggcaggccctcgaccagcagtac
gaggacgcctacaaggacggcgagacgagtgtccgcaaggagtgtcccaccctccaggca
gccacctttttcgacgggtggttcgaggacggcgagcagaccggactctaccccgtcgtg
agcgtccgccgcgaagagggtaacggcgacctctacggtcgggcggaactctacacggcg
atccccgagcgcgtgacgcgaacgttgttcgacgatctctacgcgtcggtcctgatgagt
gcgaccctgcgccccttcgacgtgaccgaggccgtcctgggcctggaggacccggagacg
atggcctacggcccccagtttcccgaggagcgccgccggacctacgccgtcgacgtcccg
tcgctgttttccagccggcgggacgaccccgaactccaggataccgtggcgagcgtcgtc
gaggacaccgtccggctgacgccggggaacaccctcgccttcttcccgagttacagcgag
gccgagcgctaccacgacgccgtcgacgtcgaggcgacgaaatacctcgacgaaccgggg
acccgcgcccaagaactgcgcgagaccttcaccgacggtgacgacggcgtcctcttcacc
tcgctgtggggcaccctcggcgagggcgtgagttacgacggcgacgacgcccggacggtc
ctggtcgtcggcgtcccctatccctacctcgacgatcggatggacgccgtccaggacgcc
tacgacgcgaccttcgacgccgaggaggccgggtggcgctacgccgtcgagatcccgacg
atccgcaagactcgacaggcgatgggccgagtcgtccgctcgccggcggatttcggcgcg
cgggtactggtcgaccggcgctataccgaaaaagccgaaatcgagtcgccggagtacgcc
gtccggggcaccttcccgccggtcgagcgcggcgagatgatcgacgtcgagccggagaaa
ctcaagttcggattgctcaacttctacgccgacatggacgcctacgacggcgagccaccg
gaaccctga
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