Halorhabdus tiamatea: HTIA_1631
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Entry
HTIA_1631 CDS
T02781
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hti
Halorhabdus tiamatea
Pathway
hti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HTIA_1631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hti03019
]
HTIA_1631
Messenger RNA biogenesis [BR:
hti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HTIA_1631
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
CCQ33758
UniProt:
F7PNK6
LinkDB
All DBs
Position
complement(1632075..1633418)
Genome browser
AA seq
447 aa
AA seq
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MEIEIATIGGYEEVGRQMTAVRAGEDVVIFDMGLNLSKVLIHDNVETERMHSLDLIDMGA
IPDDRVMSEIEGDVKAIVPTHGHLDHIGAISKLAHRYDAPIMATPFTIELVKQQIQGEEK
FGVENDLVKMDAGASTRIGDDGVELEFVNVTHSIIDAINPVLHTPEGAIVYGLDKRMDHD
PVLGDPIDMDRFREIGEEGVLCYIEDCTNAQKKGRTPSESVARRHLKDVMYSMADYDGGI
VATTFSSHIARVKSLVEFADDIGRQPVLLGRSMEKYSGTAERLDFVEFPEDLGMYGHRKS
VDRTFKRIMSEGKENFLPIVTGHQGEPRAMLTRMGRGDTPYELEEGDKVIFSARVIPEPT
NEGQRYQSETLLKMQGARIYDEVHVSGHLNREGHYEMLNALEADHLIPAHQNMEGFAPYV
ELAESEGYELGEDLHVTRNGNVITLVE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgagattgccaccatcggcggctacgaggaagtgggacgacagatgactgcg
gtgcgggcgggcgaggacgtcgtgatcttcgacatgggcctgaacctctcgaaggtcctg
attcacgacaacgtcgagaccgagcggatgcacagcttagatctgatcgacatgggtgcg
atccccgacgatcgcgtcatgagcgagatcgagggtgacgtcaaggccatcgtgccgacc
cacggtcacctcgaccacatcggcgcgatcagcaaactcgcccaccgctacgacgcgccg
atcatggcgacgccatttacgatcgaactcgtcaaacagcagatccagggcgaggagaag
ttcggcgtcgagaacgatctcgtgaagatggacgccggcgcgagcacccggatcggcgac
gacggcgtcgaactcgagttcgtcaacgtcacccactcgatcatcgacgcgatcaacccc
gtcctccacacgcccgaaggcgcaatcgtctacgggctggacaagcgcatggaccacgat
ccggtcctcggcgatccgatcgacatggaccggttccgtgagatcggcgaggaaggtgtc
ctgtgttacatcgaggactgtacgaacgcccagaagaaagggcgcaccccgagcgagtcc
gtcgcgcgacgccacctcaaggacgtcatgtacagcatggcggactacgacggcggcatc
gtcgccacgacgttctccagccacatcgcccgcgtgaagagtctcgtcgagttcgccgac
gatatcggtcgtcaacccgtcctgctgggccgctcgatggagaagtactccgggacggct
gaacgcctcgacttcgtcgagttccccgaggatctggggatgtacggccaccgtaagtcc
gtcgaccggacgttcaagcgcatcatgagcgagggcaaggagaacttcctcccgatcgtg
accggccaccagggcgagccccgcgcgatgctcacccggatgggccggggcgacacgccc
tacgaactcgaggagggcgacaaggtcatcttctcggcccgtgtgattccggagccgacc
aacgagggccagcgctatcagagcgagacgctcctgaagatgcagggcgcacgcatctac
gacgaggtccacgtctcgggtcacctcaaccgcgagggccactacgagatgctcaacgcc
ttggaggccgaccatctcatcccggcccaccagaacatggaagggttcgcgccgtacgtc
gaactcgccgagagcgagggctacgagctcggcgaggacctccacgtcacgcgaaacggt
aacgtgatcacgctggtcgaataa
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