KEGG   Halorhabdus tiamatea: HTIA_1737
Entry
HTIA_1737         CDS       T02781                                 
Name
(GenBank) replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
hti  Halorhabdus tiamatea
Pathway
hti03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HTIA_1737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hti03032]
    HTIA_1737
DNA replication proteins [BR:hti03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     HTIA_1737
SSDB
Motif
Pfam: Rep_fac_C AAA Intein_splicing DNA_pol3_delta2 Rad17 RuvB_N AAA_assoc_2 AAA_14 AAA_18 RCF1-5-like_lid nSTAND3 ResIII AAA_16 AAA_7 HMG_box RNA_helicase AAA_2 AAA_24 NB-ARC HMG_box_2 TsaE Viral_helicase1 ORC-CDC6-like TIP49 EGF_LMN_ATRN NACHT
Other DBs
NCBI-ProteinID: CCQ33862
UniProt: F7PGH3
LinkDB
Position
complement(1742478..1744763)
AA seq 761 aa
MSEAESTRAGRQEVWIEKYRPQTLEDIAGHEAIVERLGSYVSRNDLSHMLFAGPAGVGKT
TAATAIARELYGEDWEENFLELNASDERGIDVVRDRVKSFARTSFGGYDYRIIFLDEADA
LCVPPGTEVVTGYPSKPEVKNIEDVAEDGEPIPSVDFETSEVQSDKGHRVDSGIADFFEL
ELADGRTIQASLSHPFFVVDEGGKLVEKELQELEPGDEIADFKDDIGVSRCESCGDWTAG
RFCSVSCKDERHSREMQGEGNPMYGTEWSAERREKIVEKLSDGRLEGEDNPNYGDDFHGV
SVWEMDEESIERFCDNLSEKRSGTSWDEWVVEADPETVKADISRSMSEWWDDLDEDEKQK
LIEKATENCEYPVCDITGDNNPMRDPEVAQKVSEALKGHEPTGGNIRHSDELGHLVRSDW
EYEVAKALQDAGVEYEYEPEFELSESVFHPDFLIGDTVVEVKGVAKLWGQTEKVKEFLET
YGEEYTFVVVGDGELPHHEHYERDEFEPALVTDGGLESVETVTIQNIEYSHRGKAYNISM
EGTPNFMLANGILTHNTSDAQSALRRTMEQFSNNVRFILSCNYSSQIIDPIQSRCAVFRF
SPLADEAVEAQVRQIAGEEAIDVTDDGIEALVYVAGGDMRKAINGLQAASMSGDTVDEEA
VFEITSTARPEDIHEMVDFALDGDFTAARSRLDTLLTEEGIAGGDIIDQLHRTVWEFDLS
DAAAVRVLDRVGEADYRITEGASERIQLEALLASLALDGRE
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgagcgaggccgagtcaacccgggcgggtcgacaggaggtctggatcgagaagtaccgc
ccccaaaccctcgaagacatcgcgggccacgaggccatcgtcgaacgactgggcagctac
gtctcacgcaacgacctcagccacatgctgttcgccgggccggccggcgtcggcaagacg
accgccgccaccgccatcgcgcgggaactctacggcgaggactgggaggagaacttcctc
gaactcaacgcgagtgacgaacgcgggatagacgtcgtccgcgaccgcgtcaagagcttc
gcgcgcacttcttttggcggctacgattaccgaattatattcctcgacgaggccgacgca
ctgtgcgtgccgcctggaaccgaggttgtaacggggtatccgtcgaagccagaggtgaaa
aacatcgaagacgtagcagaagacggagaaccgattccatccgtcgatttcgagaccagc
gaggtccaatccgacaagggacaccgtgtcgactccggcatcgcggatttctttgaactc
gaacttgcggatggacggaccatccaggcgagcctctcgcatccgtttttcgtggtcgat
gaaggtgggaaactcgtcgagaaagagctacaggaactggagccgggtgacgagatagct
gatttcaaagacgacatcggcgtttcgcggtgtgaatcctgtggtgactggaccgcggga
cggttctgttcggtttcctgcaaggacgagagacacagtcgtgagatgcagggtgagggc
aatcccatgtatgggacggagtggtccgcggaacgacgcgagaaaatcgttgagaagctc
tccgacgggagacttgaaggtgaagacaacccgaactacggcgatgatttccacggcgtt
tctgtctgggaaatggacgaagaaagcatcgaacgcttctgtgacaatcttagcgagaaa
cggtcaggaacgtcctgggacgaatgggttgtcgaggccgatcccgagacggtaaaagcg
gacatcagccggtcgatgtccgagtggtgggacgatctggatgaggatgagaaacaaaaa
ctgatcgagaaagccaccgagaattgcgagtatcctgtctgtgacatcaccggcgataac
aacccgatgcgggaccccgaggtagctcagaaagtctcggaagccctcaaaggtcacgaa
ccgacgggtgggaacatcagacacagcgatgaactcggccatctcgtccgatccgactgg
gagtacgaagtcgcgaaggcgttgcaggatgctggcgtcgaatacgagtacgaaccggag
tttgagctctccgagtcagtgttccatcccgatttcctcatcggcgacactgtcgtggag
gtcaaaggcgtcgccaagctgtggggacagaccgagaaggtgaaggaatttctggaaacg
tacggtgaggagtacacgtttgtcgttgttggggacggcgaactgccacaccacgaacac
tacgagagagacgaattcgaacctgctctcgtgaccgacggtggactggagtccgtcgaa
acggttacgatccaaaatatcgaatacagtcatcgtggcaaggcgtacaatatcagcatg
gaggggacgccgaacttcatgctcgccaatgggatcttgacccacaacacctcggacgct
cagtcagcgcttcgccggacgatggagcagttctcgaacaacgtccggttcatcctctcg
tgtaactactccagtcagatcatcgacccgatccagtcccggtgtgccgtcttccggttc
tcgccgctcgccgacgaggccgtcgaagcacaggtccgtcagatcgccggcgaggaggcc
atcgacgtcaccgacgacgggatcgaggccttagtctacgtcgccggcggtgacatgcgc
aaggcgatcaacggccttcaggccgcctcgatgtcgggcgatacggtcgacgaggaagcg
gtcttcgagatcacctcgacggcccgacccgaggacatccacgagatggtcgacttcgcc
ctcgacggcgacttcaccgccgctcgctcgcgtctcgacaccctgctgaccgaggagggg
atcgccggcggcgacatcatcgaccagcttcaccgcaccgtctgggagttcgacctctcc
gatgcggcggcggtccgcgtcctcgatcgcgtcggcgaggccgactaccgcatcaccgag
ggcgcgagcgaacggatccagctcgaagcactgctcgcatcgctcgcactcgacggccgg
gagtga

DBGET integrated database retrieval system