Halorhabdus tiamatea: HTIA_1762
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Entry
HTIA_1762 CDS
T02781
Name
(GenBank) putative helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hti
Halorhabdus tiamatea
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hti03400
]
HTIA_1762
Enzymes [BR:
hti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HTIA_1762
DNA repair and recombination proteins [BR:
hti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HTIA_1762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CCQ33886
UniProt:
F7PGR3
LinkDB
All DBs
Position
1785894..1789529
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AA seq
1211 aa
AA seq
DB search
MTEEPEEIQLTEEQEDALVQGRNVAITAGAGTGKTTTLTERYVTILAENPSLTPENIVTI
TFTRKAAAELTERVRAEVYDRLEAVDSPEAYHRWRNILDDLEDGYVHTIHAFCTRLLRER
AVEAPVPLGFDVLDEDGAATLQREVVTEFLERNQDDDDVELLAQLWSRDQLVDVLAGLLD
ERPQSESVLEAWRDAEIDDYVDICWEVVCDLDVADARQTLYADGLLEQLRTVAGRVDREE
TIADADGLWAYQTFTEVATTLPEEPEDSDPRDCQRAILDLYEACEKKNGGLYSSSGYVVG
DRDEWDEYGDVYDDLKDAIDAVIAAVEPHADTVETTPGELEANSAHYALALMRVFDDVLA
AYADEKERRDTLDFPDVIETTLEFLRANDTVTERFQDQFAAVMVDEFQDTDPRQWELVKL
LTGVDEQTASNVFLVGDEKQSIYGFRGADVTTFGAARAELQAVNEARGVDNVPDREAESP
TALELSGNFRTLDEPLSFLNELFEYLFKPEGDIHEPYEAPPQELTTQRDRVEDIEGLTGS
VEYLAVPDDADMAAELFGDDHPVAEGALDHTIEAEAQALAARLTHLFDDPPQVQDPDTEV
HRDATPDDTAILLRRRTHLDRYQRALEEYDIPYTVVGGVGFYDTPEVQALTNLLRVLGDP
QDDVSLYGVLRSPLFGFTDDRLAPAVAEADSVWDALAETDYPQLADAFDLLTTWRTLSGC
ATPSEDGVLPWNRLLSRVIDDTGYLASVSADERGQQAVANVEKFRDQVRTWSENGVHTAA
GLLHRIDRQAEIDPREGEADIPGDAEGVRIMTIHSAKGLEFPIVTVPDLGSDLNFGRSVD
DHGYVRLVEGTDNAPPLPAVGGPNPSDAFSIEKTAFHEYADRQSLARERAESKRLLYVAC
TRTRDHLLLCGTHDIEVDESGAIELGEPATFDNADRWRDWLQPALLDEVLVAEAIRDGQA
RSELGGASYTVRSPPRPVDCHTDDATVDAAPEISISSPLTQASAKRIAATTLVNAVADAS
SGGHSYSQSEETVGLSPTTFGTVVHRINELRPPRDDWPKLIRRLSQMAGEEPTESDLRDA
IDHAGDAVKFVDEVEADANLQAVYNEYSVIARIGKSRIVGDIDRLLVTPNAFHIIDYKTN
DLSSTTSDELAEHYRPQMLAYALALLQHDQNRDVRASLRFTDDGVEERFNWTSDQMSEIE
SELRPMMDLVE
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggaacccgaagagattcagctcacagaggaacaggaggacgcgcttgtccag
ggccgaaacgtcgcgatcactgccggcgccgggacggggaagacaacgacgcttaccgag
cggtacgtgacgatactggccgagaacccgtcactcacgccggagaatatcgtcacgatc
actttcacgcgaaaggccgctgccgaactaactgagcgcgttcgggcggaggtgtacgac
cggctcgaggccgtcgactctccggaggcctatcaccgctggcgaaacattctcgatgat
ctggaggacggctacgtccacacgattcacgctttctgtacccggctcttgcgagaacgg
gctgtcgaggctccggtcccgctcggcttcgacgtgctcgacgaagacggcgccgcgaca
ctccaacgcgaagtcgtgacggagttcctcgaacgcaaccaggacgatgatgacgtggag
ctccttgcccagctctggagtcgcgaccagttggtcgatgtactcgctggattactcgat
gaacgcccacagagcgagtccgttctcgaggcgtggcgtgacgccgagatcgacgactac
gtcgatatctgttgggaggtcgtttgtgatctcgatgttgccgacgcccgacagacgctg
tatgcggacggactcctcgagcagctacgcacggtcgcgggccgcgttgaccgcgaggaa
actattgctgacgcggacggcctttgggcctaccagaccttcaccgaggtcgcgacgaca
ctccctgaggaacctgaagatagcgatccccgcgactgtcagcgggcaatcctcgacctc
tatgaggcctgtgagaagaaaaacggcggcctgtacagcagttcggggtacgtcgtcggc
gatcgggacgagtgggatgagtacggtgatgtctacgatgatctgaaggatgccatcgac
gcggtcatcgcggccgtcgaaccgcacgcggatacggtcgagacgacgccgggggaactg
gaagcgaatagcgctcactacgcgctcgccctgatgcgtgttttcgacgatgtcctcgct
gcctacgccgacgagaaagagcgccgcgatacgctcgacttccccgacgtgatcgagacg
accctcgagttcctgcgagccaacgatacggtcacggagcggtttcaagaccagtttgcg
gccgtgatggtcgacgagttccaggacacggacccgcgacagtgggagttagtcaagctc
ctcaccggcgtcgacgagcagacagcgtcgaacgtctttctggtcggcgacgagaagcag
agtatctacggattccgtggggccgacgtgacgacatttggggcggcgagagcggaactc
caggccgtcaacgaagcccgtggggtcgacaacgtccccgacagagaggccgagagtccg
acggcgctcgaactctccgggaacttccggacactggacgagccgttatcgttcctgaac
gagctcttcgagtacctgttcaagccagagggagacatccacgaaccctacgaagcgcca
ccgcaggagttgaccacgcaacgcgaccgtgtcgaggacatcgagggactgaccgggagt
gtcgagtatctcgctgtgcccgacgacgccgatatggcagcggaactcttcggcgacgat
catccggtcgccgaaggcgcgctcgatcacaccatcgaagcagaggcgcaagcgctcgct
gctcgtttgacccacctgttcgacgatccgccgcaagttcaagatcccgatacggaagtt
catcgcgacgctactcccgacgacacggcaatcctcctccgccggcgaactcatctagat
cggtatcagcgcgccctcgaggagtacgacatcccttacactgtcgtcggtggcgtcggg
ttctacgatacgcctgaggtccaggcgctcacgaatctgcttcgggtactcggtgaccca
caagacgatgtctctctctatggggtgcttcggtcgccgctgttcggattcaccgatgac
cgcctcgcaccagctgtcgcagaggccgattcagtgtgggatgcgctcgccgagacggac
tatccacagctcgcggatgccttcgacctcctcacgacgtggcggacgcttagtggctgc
gcgacgccgtctgaggatggcgtccttccgtggaaccgcttgttgtcccgagtgatcgac
gacacggggtatctggcgagcgtgagtgctgacgaacgcggccagcaggccgtcgcgaac
gtcgagaagttccgcgaccaagtccgtacttggagcgaaaacggtgttcacacagctgcc
gggttgctccaccggatcgaccgccaagccgagatcgaccctcgtgagggggaggcagat
attccgggtgacgctgagggggtccggattatgacgatccattctgcgaaaggactcgag
tttccgatcgtcaccgtccccgatctcgggagtgacctcaacttcggtcgctccgttgat
gaccatggctacgttcgacttgtggagggaactgataacgcgccccctctgccggcggtc
ggtgggccaaatccgagcgatgcgttctcgattgagaagacagcctttcacgagtatgct
gaccggcagtcactggcccgagagcgtgcggagtcgaaacgcctcctctatgtagcctgt
acacggacacgagatcacctccttctctgcggcactcacgacatcgaagtcgacgagtct
ggcgccatcgagctcggagagccagcaaccttcgacaacgcagaccggtggcgagactgg
ctacagccagctctcctagacgaagtcctcgtcgccgaggcgattcgtgacggacaggct
cgtagcgagttgggtggggccagctataccgttcgtagcccaccgcgaccagtagactgt
cacaccgacgacgccactgttgatgcagcgccggaaatctcgatttcttcgcccctgacg
caggcgtcagcgaaacggatcgcggccacgacgctggtgaatgcggttgcggatgcgtct
tcaggcggtcacagttactcccagtccgaggagacagttggcctaagccctacgacattt
gggacggttgtccaccggatcaatgaacttcgcccaccgagagacgactggccgaagctg
attcggcgtctgagtcagatggccggtgaagagccaacggaatccgacctccgtgatgct
atcgatcacgccggtgatgcggtcaaatttgtggatgaggttgaggccgatgccaacctc
caagcggtctataacgagtattctgttatcgccaggattggtaagtcgcgaatcgtcggt
gatatcgaccgactactcgttacgccaaatgccttccacattatcgattacaaaacgaac
gatctctcatcgacgacatcggatgagctagcagaacactatcgaccacaaatgctcgcg
tatgctcttgcgctccttcagcatgaccaaaaccgtgacgtgcgagcttcactccgattt
actgacgatggcgtagaagagcgatttaattggacgtcggatcagatgtccgaaattgaa
tctgaacttcgaccaatgatggacctagtggagtag
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integrated database retrieval system
