Entry |
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Name |
(GenBank) replication factor A
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KO |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:hti00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HTIA_2003
03420 Nucleotide excision repair
HTIA_2003
03430 Mismatch repair
HTIA_2003
03440 Homologous recombination
HTIA_2003
03460 Fanconi anemia pathway
HTIA_2003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:hti03000]
HTIA_2003
03032 DNA replication proteins [BR:hti03032]
HTIA_2003
03400 DNA repair and recombination proteins [BR:hti03400]
HTIA_2003
Transcription factors [BR:hti03000]
Eukaryotic type
Zinc finger
Cys2His2 others
HTIA_2003
DNA replication proteins [BR:hti03032]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
HTIA_2003
DNA repair and recombination proteins [BR:hti03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
HTIA_2003
MMR (mismatch excision repair)
HTIA_2003
DSBR (double strand breaks repair)
HR (homologous recombination)
HTIA_2003
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(2026032..2027510)
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AA seq |
492 aa
MGAIEDVYADLDADVSEDNFREAVEEKVEQMGGLADEETAAMLIAHELTENEAQTVADVQ
AGMEEVRFLAKVLSIGELRTFERDGADEDGRVINVEAADETGSLRLTFWDGEAVAVDEGE
VEVGDVLRVKGRPQEGYNGLEVSVDQAEQDLDASIDVEPGDGETIDALTMGQSNVNVEGV
VLDTEPVRTFDRDDGSEGRVANLSIGDETGRVRVTLWDERADRVEEIDAGATVEVVDGYV
REREGDLEVHVGEEGAIDELEDGDVAYAPETTPIDDVELDETVDIGGVVRSTDPTRTFDR
DDGSEGQVKNIRIQDDTGDIRVALWGEKADRDLAPGDEVVCADVEIQDGWQDDLEASAGW
GSTVVVLEDGASMVRTPDAGDSGGDGSDSASRDAGSSTGLSAFADDGDGGETASDDSDAE
SGRTDGAKTDDTDADGEQIEFTGTVVQTGDPVIVDDGEQTVTVDTAESVRLGEEVTIRGQ
RRDGEIDAEELF |
NT seq |
1479 nt +upstreamnt +downstreamnt
atgggtgcgatagaggacgtatacgcggatctcgacgccgacgtctccgaggacaatttc
agggaagccgtcgaggagaaggtcgaacagatggggggactggccgacgaggaaaccgcg
gcgatgttgatcgcccacgaactcaccgagaacgaggcccagacggtcgccgacgtccag
gccggcatggaggaggtccggtttctggcgaaggtgctctcgatcggcgagttgcggacc
ttcgaacgcgacggggcggacgaagacggccgcgtgatcaacgtcgaggcggccgacgag
accgggagcctccggctgaccttctgggacggcgaggccgtcgccgtcgacgagggtgag
gtcgaagtcggcgacgttctccgggtgaagggtcgcccgcaggagggctacaacggcctg
gaggtcagcgtcgatcaggccgaacaggacctcgacgcgtcgatcgacgtcgaacccggc
gacggcgagaccatcgacgcgctcacaatggggcagtcgaacgtcaacgtcgagggcgtc
gtcctcgacaccgaaccggtccggaccttcgaccgcgacgacggctcggaagggcgggtc
gccaatctctcgatcggcgacgagaccgggcgcgtgcgggtgacgctgtgggacgagcgg
gccgaccgggtcgaagagatcgacgctggcgcgaccgtcgaggtcgtcgacggctacgtc
cgggaacgcgagggtgacctggaggttcacgtcggcgaggaaggggcgatcgacgagctc
gaggacggggatgtcgcgtacgcgccggagacgacgccgatcgatgacgtggagttagac
gagacagtcgacatcgggggcgtcgttcgttcgaccgatccgacgcggacgttcgaccgc
gacgacggctcggagggccaggtcaagaacatccggatccaggacgacaccggcgacatc
cgggtggcgctgtggggcgagaaggccgaccgcgacctcgcgccgggcgacgaggtcgtc
tgtgcggacgtcgagatccaggacggctggcaggacgacctcgaagcctcggccgggtgg
ggatcgacagtcgtcgttctcgaggacggcgcgtcgatggtgaggacgcccgacgcgggc
gattctggcggtgacgggagcgatagtgccagtcgggacgctggcagttcgaccgggctc
tcggcgttcgccgatgacggagacggcggggagacagcgagcgatgattcggacgctgag
agtggccgaacggacggagcgaagacagacgacacggacgcggatggcgagcaaatcgag
ttcaccgggaccgtcgtccagactggtgatccggtgatcgtcgacgacggcgagcagacc
gtcaccgtcgacaccgccgagtcggtccgccttggcgaggaagtcacgatcagaggccag
cgacgcgatggcgagatcgacgccgaagaactgttctag |