Halorhabdus tiamatea: HTIA_2071
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Entry
HTIA_2071 CDS
T02781
Name
(GenBank) transcription initiation factor B
KO
K03124
transcription initiation factor TFIIB
Organism
hti
Halorhabdus tiamatea
Pathway
hti03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HTIA_2071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hti03021
]
HTIA_2071
Transcription machinery [BR:
hti03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HTIA_2071
Prokaryotic type
Archaeal type
TFB
HTIA_2071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
zf-C2HC_3
HTH_3
Motif
Other DBs
NCBI-ProteinID:
CCQ34185
UniProt:
F7PG02
LinkDB
All DBs
Position
2087869..2088690
Genome browser
AA seq
273 aa
AA seq
DB search
MRDGQEAICSECGLVVSEARIDHGPEWRSFDDDQTDRRRTGPPVSRSRHDHGLSTRIGRD
RGAPPRRRRRIARLRRQHRRSQTSSKAERNLMYGIMEIRRLVGRLSLSRSFREDACVLFE
TSQGEGLLHGRSIEGMAAAAVYAVCRIAGVSRTVEEVSTVAHASEDELTVAYTALNRELG
LETGPIDPREYLPRFASRLDLRVDVERRARELASFVTEENLAGGRAPSGVAAACLYTAAR
EGDADVTQREVADVAGVAPATLRSTYQDVHSKA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacggccaggaagcaatctgcagcgagtgtggactggtcgtctcggaagcacga
atcgaccacggtccggagtggcgatcgttcgacgacgatcagaccgatcgccgccggacc
ggaccgccggtttcgcggtcgcgacacgatcacgggctgtcaacccggatcggccgcgac
cgtggcgcgccgccgcgacgccgacgtcggatcgcgcggttgcgccgtcaacaccggcgg
tcccagacgtcctcgaaggccgagcggaacctgatgtacggcatcatggagatccgccgg
ctcgtgggtcggctgtcgctatcccggagtttccgtgaggacgcctgcgtcctgttcgaa
acgtcccagggagagggactgttacacgggcgctccatcgaggggatggccgccgccgcg
gtgtacgccgtgtgtcggatcgccggcgtctcgcggacggtcgaggaagtctcgacggtc
gctcacgccagcgaggacgaactgacggtcgcctacactgcactcaaccgcgagttggga
ctcgaaaccgggccgatcgatccccgggagtacctgccgcggttcgccagccggctggat
ctccgcgtcgacgtcgagcgccgcgcacgcgaactcgcgtcgttcgtcaccgaggagaac
ctggccggcggtcgtgcgcccagcggggtggccgcggcgtgtctgtacacggccgcccga
gagggggacgccgacgtcacgcaacgcgaggttgccgacgtcgcaggggtggcacccgca
acgctccgctcgacgtatcaggacgtgcacagcaaagcgtag
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