Halorhabdus tiamatea: HTIA_2080
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Entry
HTIA_2080 CDS
T02781
Name
(GenBank) ski2-like helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
hti
Halorhabdus tiamatea
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hti03400
]
HTIA_2080
Enzymes [BR:
hti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HTIA_2080
DNA repair and recombination proteins [BR:
hti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
HTIA_2080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
Helicase_C
HHH_5
HTH_61
DNA_pol_lambd_f
DEXQc_Suv3
Lipase_chap
Motif
Other DBs
NCBI-ProteinID:
CCQ34194
UniProt:
F7PFZ4
LinkDB
All DBs
Position
complement(2099004..2101472)
Genome browser
AA seq
822 aa
AA seq
DB search
MDVADIPGVPAWLPEHLQEDGIEALYPPQAEAVERGVTGGANLVASVPTASGKTLIAELA
MFSAITSGTDGADDHEGTADETVTDGTALYIVPLRALASEKREEFEQFEAYGLEVGVSTG
NYESDGGWLADKDVVVATSEKVDSLVRNDAPWIDDLDCVVADEVHLVDDGERGPTLEVTL
AKLRKRNPDLQTVALSATIGNAEALAEWLDAELVDSTWRPIDLKKGVHYGQALHLEDGNQ
KRLPVRDSEKQTAAIVRDTLEDDGSTLVFVNSRRNAEAAARRLASTTDPHLDGEERDRLA
EIAAEIRDVSDTETSDDLAEAVEQGAAFHHAGLSREHRSLVEDAFQERLVKVISATPTLA
AGVNTPSRRVVVRDWRRYDGTAGGMQPLSVLEVHQMMGRAGRPGLDPYGEALLLASNHDE
LDELFERYVWADPEPVQSKLAAEPALRTHILSTVASGFANSREGLLDFLEATLYASQTTE
GGRLETVVDEVIAYLAANDFLTRADDEEGTLRATSIGQTVSRLYLDPMSAAEMLDGLREF
ERTAGQRASRSAPDGEQDGEPPGFEPASELVSDAGDDIGESDDTPQPTAMGLYHLVSRTP
DMYELYLRSGDEEEYSMEAYEREDEFLGAMPSEFEEGRFEDWLSALKTARLLEDWADEIE
EGTITERYGVGPGDIRGKVETASWLLNAAERLAGEVGLDVTPAIREARVRVEHGVRAELV
DLAGVRGVGRKRARRLFATGIESREDLREAEKSVVLGALRGREKTAENILTNAGHRDPSM
EGVTPTTPDGDPTGTDDAVANGAGVRDGDEDDAADQSSLGDF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggacgttgcggacattccgggggtacccgcgtggttgcccgagcaccttcaggaggac
ggcatcgaggcgttgtatccaccacaggccgaggccgtcgagcggggcgtcaccggcggc
gcgaacctcgtcgcgagcgtgcccacggccagtggcaagaccctcatcgccgaactcgcg
atgttctcggcgatcacgagcgggaccgacggagcggacgaccacgaagggacagccgac
gagaccgtgactgacggcaccgccctctacatcgtcccgttgcgcgccctcgccagcgag
aaacgcgaggagttcgaacagttcgaggcctacggcctggaggtgggcgtttcgacgggc
aactacgagagcgacggcgggtggctcgccgataaagacgtcgtggtcgccaccagcgag
aaggtcgattccctcgtgcgaaacgacgcgccctggatcgacgacctcgactgcgtcgtg
gccgacgaggtccacctcgtcgacgacggcgagcgcggccccacgctggaggtcacactc
gccaagcttcgcaagcgcaacccggacctccagacggtggcgctgtcggcgaccatcggc
aacgccgaggcgctcgccgagtggctggacgccgaactcgtcgactcgacgtggcggccg
atcgacctgaagaagggggtccactacgggcaggcactccatctcgaagacgggaaccag
aagcgcctgcccgtccgggacagcgagaaacagaccgcggccatcgtgcgggacacgctc
gaggacgacgggtcgacgctggtgttcgtcaactcccgccggaacgccgaggccgccgcc
cgccggctcgcgtcgacgaccgacccccatctcgacggcgaggaacgcgaccgcctcgcc
gagatcgcggcggagatccgggacgtcagcgacaccgagaccagcgacgacctggccgag
gccgtcgagcagggggccgcgtttcaccacgccgggctctcccgggaacaccgatccttg
gtggaggacgcctttcaggagcgcctggtgaaggtgatttcggcgaccccgacgctggcg
gcgggggtcaacacgccgtcccgtcgcgtcgtcgtccgtgactggcggcgctacgacggg
actgcgggtgggatgcaacccctctcggtgctggaggtccaccaaatgatggggcgggcc
ggccgccctgggctggacccctacggcgaggcactactgctggcgagcaaccacgacgaa
ctcgacgaactgttcgaacgctacgtctgggccgaccccgaacccgtccagtcgaaactc
gcggccgagccagcccttcgcacccacatcctctcgacggtcgcctccggctttgcgaac
tcccgtgagggactcctcgactttctggaggccacgctctatgccagccagacgactgag
gggggccgcctggagaccgtcgtcgacgaggtgatcgcctacctggccgccaacgacttc
ctcacgcgggcggacgacgaagagggcaccttgcgggcgacctcgatcggccagaccgtc
tcgcggctctatctcgacccgatgagcgcggcggagatgctcgacggactccgtgagttc
gagcggacggccgggcagcgagcatctcgatcggcccccgacggggagcaggacggtgag
ccgcccggcttcgagcctgccagtgaactggtgtcggacgcgggcgacgacatcggagag
tccgacgacactccccagccgacggcgatggggctgtatcacctcgtctcccggacgccg
gacatgtacgaactctacctccggtcgggtgacgaggaggagtactccatggaggcctac
gagcgcgaggacgagttcctcggggcgatgccaagcgagttcgaggagggccgtttcgag
gactggctgtcggcgctgaagaccgctcgacttctcgaagactgggccgacgagatcgag
gaggggacgatcaccgagcgctacggcgtcgggccgggcgacatccgcgggaaggtcgag
acggcaagctggctgctcaacgctgccgagcgcctggccggcgaggtcggcctggacgtg
acgcccgcgatccgggaggcccgcgtgcgcgtcgaacacggcgtccgggcggaactggtc
gatctcgcgggcgtccgtggcgtgggtcgcaagcgcgccagacgactgttcgcgacgggg
atcgagtcccgtgaggacctccgggaggccgagaaaagtgtcgtgcttggggcgcttcgt
gggcgagagaagactgccgagaacatcctgacgaacgccggccaccgcgatccctcgatg
gagggagtgacgccgaccactcccgacggagacccgaccggcacggacgatgccgtcgcc
aacggggccggcgtgcgcgacggcgacgaggacgacgctgccgaccagtccagcctgggt
gatttctga
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