Halorhabdus tiamatea: HTIA_2243
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Entry
HTIA_2243 CDS
T02781
Name
(GenBank) helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hti
Halorhabdus tiamatea
Pathway
hti03022
Basal transcription factors
hti03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HTIA_2243
09124 Replication and repair
03420 Nucleotide excision repair
HTIA_2243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hti03021
]
HTIA_2243
03036 Chromosome and associated proteins [BR:
hti03036
]
HTIA_2243
03400 DNA repair and recombination proteins [BR:
hti03400
]
HTIA_2243
Enzymes [BR:
hti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HTIA_2243
Transcription machinery [BR:
hti03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HTIA_2243
Chromosome and associated proteins [BR:
hti03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HTIA_2243
DNA repair and recombination proteins [BR:
hti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HTIA_2243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
AAA_22
AAA_30
nSTAND_NTPase5
AAA_11
Mg_chelatase
Ble-like_N
Motif
Other DBs
NCBI-ProteinID:
CCQ34354
UniProt:
S6CUD7
LinkDB
All DBs
Position
complement(2261267..2263705)
Genome browser
AA seq
812 aa
AA seq
DB search
MGTGEHEEATWRERFGFEEPYDDQADAIETAIAAGRRQGFLAMEGPCGTGKTMAALTAGA
TLVREDDYERLLVVTPVKQQRRQFVADLRQLNAGLDEPLAGVALVGKRDLCPYGREDVFP
PDSGVHDRCEDLRENTAELVESDGSSDDRPVADAVIRPRNDDVWWDPQTGSDLAKAARPG
GIGQQAVAGALSTAGAESPYRRTQPTAPDDIGGEDPPLYCPFEADWYARNRGSPIGFDAG
AESVVTADEYLPGAVERGTCPHRAMQTLVGAADVVIGNYNHLFDPASRGLIEGILDERTF
VIVDEAHRVEERVRDLLSDRLGRQTIVQARNDCHQLLSLSRQSGDHKREVRAHLGSQDVP
LEAVERARDFYDDLLGWLDDRIADHLDDAVGRGWRADETALPAHDLEIPLRDPDEPEPDE
LTRWAEQAGYDGGLFRQLDTIGLAVEDASEELGIGRTPVVAAAGVIARRWWERDHARTFR
EIELDHSPRDDQRIEGWRSTYTAGLTLFDCLPAESLASTFDDVGGGILMSATLAPLDVFT
RVAGLDALGGDGGGGAGQPAGDQDDGRSVLTRSYGLSFPPANRASWIVDATPFTARNRGD
PATMEPLGNEWNSTRDEYAHVLRAIARNPGNVLIAMPNYREATWAGAYLDGAVEKPVLVD
ESSSNEATEDLKGSFFAGEGKVLVTSTRGTLTEGVDYDGAKLRAAAVVGVPLVNIGSPRV
RAVQRAYGDVFGEDHAFEYALTIPAVRRARQAIGRVIRGAEEVGVRAFVGARYTPDARHS
VYGYLSPAEREEFVTMSPEFLPDQIDRFWAER
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggggacgggcgaacacgaggaggcgacctggcgggagcgattcggcttcgaagagccc
tacgacgaccaggccgacgcgatcgagacggcgatcgcggccggtcgccgacagggcttt
ctcgcgatggaaggcccgtgcgggaccgggaaaacgatggccgccctcaccgccggtgcg
acactcgtccgcgaagacgactacgagcgcctgctcgtggtgacgccggtcaaacagcaa
cgccgccagttcgtcgccgacctccgacagctcaacgccggcctcgacgaaccgctcgcc
ggcgtcgctctcgttggcaagcgcgacctctgtccctatggccgggaagacgtgtttcca
ccggattcaggggttcacgatcgctgtgaggacctccgagagaacacggctgaactcgtc
gagagcgacggatcgagcgacgatcgccccgtcgccgacgcggtaatccgcccgcggaac
gacgacgtctggtgggacccacagacgggcagcgacctggcgaaagcggcccgacccggc
gggatcggtcagcaggcggtcgcgggcgcgctgtcgacagcaggggccgagtcgccctat
cgccgaacccagccgaccgcccccgacgacatcggcggcgaggacccgccgctttactgt
cccttcgaggccgactggtacgcccgcaatcggggctcaccgatcggcttcgacgcgggc
gcggaatcggtcgtcaccgccgatgagtacctgcccggggccgtcgaacgggggacctgt
ccccaccgcgccatgcagacgctcgtcggagccgccgacgtggtgatcggcaactacaac
cacctcttcgatcccgcctccagggggttaatcgagggcatcctcgacgagcggacgttc
gtgatcgtcgacgaggcccaccgcgtagaggagcgcgtccgggacctgctgtcggaccga
ctcggtcgccagacgatcgtccaggcccgcaacgactgccaccagttgctctcgctttcc
cgccagagcggggatcacaaacgcgaggtccgggcccacctcggcagccaggacgtcccc
ctggaggccgtcgagcgtgcccgggacttctacgacgacctgctgggctggctcgacgat
cggatcgccgaccatctcgacgacgcagtggggcgaggctggcgggccgacgagacggcg
ttgccggcccacgacctggagatcccgctccgcgatcccgacgagcccgaacccgacgaa
ctcacgcgctgggccgagcaggcgggctacgacggcggactcttccggcaactcgatacg
atcggcctggccgtcgaggacgcgagcgaggaactcggcatcgggcgcacgcccgtcgtc
gccgctgccggcgtgatcgcccgccggtggtgggagcgcgaccacgcgaggacgttccgg
gagatcgaactcgatcactccccacgagacgaccagcgcatcgaaggctggcgatcgacg
tacaccgccgggctgacgctgttcgattgtctgccggcggaatcgctggcgtcgacgttc
gacgacgtcggcggcgggatcctgatgagtgcgacgctcgccccgctcgacgtgttcacg
cgcgtggccgggctcgacgcgctgggtggcgatgggggcggtggcgctggccagccagcc
ggagaccaggacgacggtcgctccgtcctgacccgttcctatggcctctcctttccgccg
gcgaaccgggcaagctggatcgtcgacgcgacgccgtttaccgcgcgaaatcgtggcgat
ccagcgacgatggaaccgctcggcaacgagtggaactcgacccgagacgagtacgcccac
gtcctacgggccatcgctcgcaacccgggcaacgtcctgatcgcgatgccgaactaccgc
gaggcgacctgggccggcgcgtatctcgacggcgcggtcgagaagcccgtcctcgtcgac
gagtcctccagcaacgaagcgacggaggacctcaaaggatcgttcttcgccggcgagggg
aaggtgctggtcacgagcacccgcgggacgctcaccgagggcgtcgactacgacggcgcg
aagctccgggcggcggcggtcgtcggcgtccccttagtcaacatcggctcgccccgcgtc
cgggccgtccagcgcgcctacggcgacgtcttcggcgaggaccacgccttcgagtacgcg
ctgacgattccggcggtcaggcgcgcccgccaggcgatcggccgggtgatccgcggggct
gaggaggtcggcgtccgggccttcgtcggggcgcggtacacacccgacgcccgccactcg
gtctacgggtatctctcgccggccgaacgcgaggagttcgtcaccatgagtccggagttc
ctgcccgaccagatcgatcggttctgggcggagcggtga
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