Halorhabdus tiamatea: HTIA_2540
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Entry
HTIA_2540 CDS
T02781
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein, MutS family
KO
K03555
DNA mismatch repair protein MutS
Organism
hti
Halorhabdus tiamatea
Pathway
hti03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HTIA_2540 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hti03400
]
HTIA_2540 (mutS)
DNA repair and recombination proteins [BR:
hti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HTIA_2540 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
nSTAND_NTPase5
AAA_14
AAA_27
Motif
Other DBs
NCBI-ProteinID:
CCQ34646
UniProt:
F7PG36
LinkDB
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Position
complement(2542909..2545602)
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AA seq
897 aa
AA seq
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MTEATGIVGEFFSLKDGAEADLLAMQVGDFYEFFGDDAETVADELDLQVSKKSSHGSSYP
MAGVPVGELTPYLTALVERGYDVAVADQHETADGHARKVTRVVTPGTLLSRTDASARYLA
AIVEGEAWGLAFADVTTGEFFVTDVDDRDAVFSELYRFDPAEMLPGPTVRADDETIERLR
ERTDAAVSLHATEAFAPGRARHRLREHFGPETIESVGIEDADAAIAAAGAVLSYVEETGQ
GVLASMTRLQRYGASDHVELDATTQRNLELTETMRGEASGSLLDTIDHTVTSAGTRTLRA
WLQRPRRSRETLEMRADSVEALTTEAMARERLRDVLGDAYDLERLASKAASGSADARDLR
AAVDTLELFATVRKIVAETPSLAESPLSQWLDEPDPDAIAELAAELDAAIVEDPPGTVTE
GGIIRSGYDEELDAVIDEHEAALEWIETLPEREQRDHGITHLSVDRNKTDGYYIQVGKSE
VENVPDHYENVKTLKNSERYTIPELTERERTIFRLEERRYDLEHRLFEELRERVAEHADR
LQRVGQALAAVDVLAALSTHAVRNDWTRPELRDTRALDVEAGRHPVVEQTTEFVPNDLRM
DDDRRFLIVTGPNMSGKSTYMRQAALIVLLAQIGSFVPARSAAVGIVDGIYTRVGALDEL
AQGRSTFMVEMQELANILHSATEESLVILDEVGRGTATYDGVSIAWAATEYLSSAQSASP
SPKTLFATHYHELTSLADHIAGVENVHVAVDGEPATSSGAGTASDDAVTFLRTVRDGPAD
RSYGVHVAELAGVPDPVVSRARDVLERLRADEAIEVQNGQTGGGTRQVVFDLDAGQMREA
GGDDGQTGDATTDGKPIVDRFGEDAPDVLETLADLDVETMSPVDLLAEVQEWQRRLE
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagcgacggggatcgtgggcgagttcttctcgctgaaagacggggctgaggcg
gatctgctggcgatgcaggtcggtgacttctacgagttcttcggcgacgacgccgagacg
gtcgccgacgaactcgatctgcaggtctcgaagaaatccagccacggatcgtcgtatccg
atggccggtgtgcccgtcggcgaactcacaccgtacctcacggcgctggtcgaacgcggg
tacgacgtcgctgtcgctgaccaacacgagacagcggacggccacgctcggaaggtcacc
agggtcgtcacgccggggacgctgctgtcgaggaccgacgcgtccgcccgctatctcgcg
gcaatcgtcgagggggaggcgtggggactcgcgttcgccgatgtcacgaccggcgagttc
ttcgtgacggacgtcgacgaccgcgacgccgtcttcagcgaactctaccgcttcgacccg
gccgagatgctgcccgggccgacggttcgcgctgacgacgagacgatcgaacgcctccgc
gagcggacggacgctgcggtgtcgctacacgcgaccgaggccttcgcgccaggacgcgcc
cgtcaccgactccgcgagcacttcggcccagagacgatcgagagcgtcggaatcgaggac
gccgacgcggccatcgcggccgccggggctgtcctcagctacgtcgaggagaccggccag
ggtgtgctcgcgtcgatgacccgcctccagcgctacggcgcgagcgaccacgtcgaactc
gacgcgacgacccagcgcaacctcgaactcacggagacgatgcgcggggaagcgagtgga
tcgctcctcgatacgatcgatcacacggtcacgagtgccggcacccgaacgttgcgcgcg
tggctccagcgcccccggcggtcgcgagagacgctcgaaatgcgggcagatagcgtcgaa
gcgctcacgaccgaggcgatggcccgcgaacgcttgcgtgacgtgctcggggacgcctac
gacctcgaacggctcgcgagcaaggctgcctcggggagcgccgacgcccgcgacctccgg
gccgcggtcgacactttagagctgttcgcgacagtccggaagatcgttgccgagacaccg
tcacttgccgagtcgccgctttcgcagtggctcgacgaacctgacccggacgccatcgca
gaactcgccgccgaactcgacgcggcgatcgtcgaagacccgccgggaacggtcacggaa
ggcggaatcatccgatcgggctacgacgaggaactcgacgccgtgatcgacgagcacgag
gcggccctcgagtggatcgaaaccctccccgagcgcgagcagcgcgaccacggcatcacg
cacctctcggtcgatcgcaacaagacggacggctactacatccaggtcggcaaaagcgag
gtcgagaacgtccccgaccactacgagaacgtcaagacgctgaagaactccgagcgctac
acgatcccggagttgaccgaacgcgagcggacgatcttccgactcgaggagcggcggtac
gacctcgaacaccgacttttcgaggaacttcgcgaacgcgtcgccgagcacgccgaccgc
ctccagcgcgttggtcaggccctcgcggcggtcgacgtgctggcggcgctttcgacccac
gcggtccgcaacgactggacccggcccgaattacgggacacgcgcgcgctcgacgtcgag
gccggtcgccacccggtcgtcgagcagaccaccgagttcgtgcccaacgacctccggatg
gacgacgaccggcggttcctgatcgtgaccggccccaacatgagcgggaagtccacctac
atgcgtcaggcggcgctgatcgtcctgctggcccagatcggctcgttcgtgcccgctcga
tcggcggccgtcgggatcgtcgacggcatctacacccgggtcggcgcactcgacgaactc
gcccagggccgttcgacgttcatggtcgagatgcaggaacttgcgaacatcctccactcg
gcgaccgaggagtcactggtcatcttagacgaggtcgggcgcgggacggcgacctacgac
ggcgtctcgatcgcgtgggcggccacggagtacctctcttcggcccagtcggcctcgccg
tcgccgaagacgctctttgcgacgcactatcacgaactcacgtcgctggccgaccacatc
gctggcgtcgagaacgtccacgtcgccgtcgacggcgaacccgcaacgagcagcggggcg
ggcaccgccagcgacgacgcggtgacgttcctgcgaaccgtccgggacggccccgcagat
cgctcctacggcgtccacgtggctgaactcgccggcgtcccggaccccgtcgtctcccgg
gcgcgggacgtcctcgagaggctccgggccgacgaggcgatcgaggtgcagaacggacag
acgggcggcgggactcgccaggtcgtcttcgacctcgacgccggacagatgcgagaggcg
ggtggcgacgatgggcagacgggagatgcaacgacggacggcaaaccgatcgttgaccgc
ttcggcgaggacgcaccggacgtcctcgaaacgctcgccgatctcgacgtcgaaacgatg
tcgccggtcgacctgctcgcggaagtccaggagtggcagcgacgactggagtga
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