KEGG   Halorhabdus tiamatea: HTIA_p2804
Entry
HTIA_p2804        CDS       T02781                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
hti  Halorhabdus tiamatea
Brite
KEGG Orthology (KO) [BR:hti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hti03400]
    HTIA_p2804
Enzymes [BR:hti01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HTIA_p2804
DNA repair and recombination proteins [BR:hti03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HTIA_p2804
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 YfdX ResIII
Other DBs
NCBI-ProteinID: CCQ34906
UniProt: S6D9B2
LinkDB
Position
pHTIA:complement(18891..23504)
AA seq 1537 aa
MIEIAIGGIISISLGWGAFSTYQAIRKDSESNSPSDTDVKSPTDADEATDLVDSREDADP
VPNEISQFLQTSHDRLDVARQRRDEGKKEEAYVEIERAEKALYDARREYDKLIESSGDNP
STNESSIKSISDKLREIADRIYDERLNLPPRNLDASISNEVPTDSEENLKAGSTQQTGGH
ALDITQSIDKTESLLKHGHSDADPVDIQQFLLKLENHRDELTAQMGELPGDSPEYEAAES
LCDKIEQEYTAEVGSITKRASAAIEPVRTATETYVRSHGEPSADRFDALKSRHSEIKSQY
SWIRHVNCSLISTSEVVKGVQAVEEQLDQLEKVFDTGSRIRAAFRTRRENVLSKKLRETW
LRQREDLLADALTLIVNGENQLFETILTEQFGSRNQVIDNVLNGWNGPSVGVLDSESTIV
CPACGTVSSNVPRYVSHRTTSDICRSKIIIPEYCENRSGNTAEAVLAVEPDDLRHSLEEI
WTSTQDVIDEVRSEAQQRGLDAICETTDQVERELQIISSLFESQLDYHELRNHLDTDEAA
RLFSSLRDDRTAIESVSFLPIENPSMKKSKKCELLVEELRGQLLCLSLITEVVESSLSHE
VTIEDTEAAINSVERLSSQTKPSMIRSEYRAVLKAIYGVLTQNRLAMVESAVSEFADATD
TVLPSPNQDSNNRAEYNRYLPTHTHAEYQADLNSVEGELQEIGDPIDKDLFLAERTDSGI
GSPTLQKRFERLRESISWYRQLLDSRQQYNRAFVENQSVACDTLFSEIGSNNFVLDEDQR
RAVIRNDTYNQVIAAAGTGKTLTLTTRVQYLVQELGVDPNRILLLTFGKDAADEMKERLG
EHFDITNVAVSTVHGYGYEILEETKETMPAVFDGTDFDNFVDDALTGNLDPVPDDFVTHF
ERYLTVRNDDEAVESEFAEKEAYYEAKRKQRYKTLDNETVKSVAERRIANFLFRHQIKYR
YEDRASWVESDEHHEVYRPDFYLPEYNIYIEHWGVDERGEVAPWFSQTSAEYRESARWKR
QQFTQNDEQTLIETHEFEHTQDRLEVILRARLESHGVLLDRLSYTELVEATFDRYEQKRI
KQELKQFIDLAKTFRLEAADIRTSIDHLSSRRHAFGEAGVALLERYEDHLDATGQIDYTD
MVNGGLNALDTDLIEDDHRFDHVLVDEFQDLADNQLALIDRMTGPDSARLFCVGDDWQSI
FSFRGADVNRFVEFEETFGDVTRTRLKENYRCPETVVTAGNDLIEINDQQIDKRVNSNSG
VDTTPLLHELDGSDYIGYEYQLRDYVRELVESYLEKGASPEDIMILCRYEAGSYLDIIRE
GLRSLDNHGYIPNKVSENISINTIHKAKGREARHVILVHAVEGDLGFPAVDHSTNLLAPV
QPMSVDSLAEERRLFYVSMTRSSGTLDIITRSGKESRFITEIRPHLESAWNGNSIAEMRG
EETRTSITAKARKLKANSHPTMRQSGVLEDPTGAVRFITWADGGQKLLDQMQYYEFQGIY
ASNYEGNPQLEIKSDTIIQQIEPPDVPTSDIEPQTLD
NT seq 4614 nt   +upstreamnt  +downstreamnt
atgatagaaatagctattggcgggatcatcagcatctcactggggtggggggcattctca
acgtatcaagctattcggaaagacagcgaatctaattcacctagtgatacagatgtaaaa
tctcccacagatgctgacgaagccactgatcttgtcgattccagggaggatgcggacccc
gttcctaatgagattagtcaatttctccagacatctcatgataggttagacgttgcgcgg
caacgacgggatgaaggaaagaaggaggaagcatatgtagagattgagcgagcagaaaaa
gcgttgtatgatgcccggagagaatatgataaactcatagaatcaagtggtgacaatcct
tctacaaacgagagctctatcaaatcaatctcggacaaattacgtgaaattgccgaccgg
atttacgacgaacggcttaatctccctccgcgcaatttagacgcgtccataagtaatgag
gtgccgacagactctgaagaaaacctgaaagcaggatctactcagcaaacgggagggcac
gccctggatatcactcagagtattgacaaaacagagtcgctgcttaagcatggccattca
gatgccgatcccgttgatatccagcagtttctactcaaacttgaaaatcaccgagatgag
ttaacagcacagatgggtgagcttccaggcgattcaccagagtatgaggcggctgaaagc
ctttgtgacaagattgaacaggagtatacagctgaagtgggctcaataacaaaaagagct
tctgccgccattgaacctgtccggacagctacggagacgtacgttcgatcacatggcgaa
ccctcggctgatagatttgatgccctcaaaagccgccatagcgaaatcaaatcacaatac
tcttggatacgtcatgtcaactgttctttgatatcgacatcggaggttgtcaaaggggta
caggcagtagaagagcagttagatcaacttgaaaaagtgttcgataccgggagtcgaatc
agagctgcgtttcgaactcgtcgagaaaacgttttaagcaagaaattacgtgagacatgg
ctacgtcaacgagaagatctccttgcagatgcacttacacttattgtgaatggagaaaat
caactatttgagaccatccttacagaacaatttggctcacgaaaccaggtaattgataac
gtgctcaacggctggaatggcccctcagttggagttcttgacagcgagtctactattgtt
tgtcctgcttgcgggaccgtctcttcaaatgtcccacgatacgtttcccaccgtaccacc
tcagacatatgtagatctaaaataatcattccggaatactgtgaaaatcgctccggcaac
actgctgaggcggttttggcagtggaacctgatgatcttcgtcatagtctcgaagaaatc
tggacatcaactcaagatgtgattgatgaagttcgatctgaggcacaacagcgtgggctc
gatgcgatttgtgaaactaccgatcaggttgaaagggaacttcagattatctcttcactc
tttgaatcccaacttgattaccacgaacttcgtaatcatcttgatactgacgaagcagcg
cgtctgttttcctcactaagggatgatcgaacggcgattgaatcggtatcattcttgccg
attgagaatccctcgatgaagaagtcaaagaaatgtgaacttttagttgaagaattgcgg
ggtcaactcctttgtctgtccctcatcacagaagtagtagagagctcactcagtcacgag
gttactatcgaggatacagaggctgcgataaattccgttgagcgacttagctcccagacg
aagccgagtatgattcgctcagagtatcgtgcagttctcaaagctatatatggtgttctc
actcagaatcgacttgcgatggttgagtcggctgtatctgagtttgccgatgcgacagac
actgtcctgccatccccgaatcaggatagcaacaaccgagctgagtacaaccgctatctt
ccaactcacacccatgcggaatatcaagctgatcttaactctgtcgagggagaacttcaa
gagataggcgaccccatcgacaaagacctgtttcttgctgagagaactgacagcggtatc
gggtcgcccacactgcaaaaacggtttgaaaggcttcgagaaagcatttcttggtatcga
cagctgcttgattcccgccagcaatacaatcgggcctttgttgaaaaccaatcagttgct
tgcgacaccttgtttagtgagatcggatcaaataattttgtacttgatgaggaccagcgg
cgggctgtcattcgaaatgacacatataatcaggtgattgccgcagcaggaaccggtaaa
acattgacgttaacgacgcgtgtccaatatctcgtacaagaactcggtgtcgatcctaac
cgaatcctcttattgacctttggcaaggatgctgctgacgagatgaaagaacggcttggc
gagcatttcgacattacgaatgtagcagtaagcactgtccatggatatggatatgagatc
ttagaagagaccaaagaaacgatgccagcggtgtttgatggaactgatttcgataacttc
gttgatgacgctttgacggggaatttagatccggtaccggatgacttcgtcacgcatttt
gaacggtatctaactgttcgaaatgacgatgaggccgtggaaagtgaattcgccgagaag
gaggcgtactatgaggccaagcgaaagcagcgatacaaaacattggacaacgagactgta
aaatcggttgcagaacgtcggattgcgaacttcttgtttcgacatcagatcaagtatcgg
tacgaggatcgtgcttcatgggttgaatcggatgaacatcatgaagtatacagaccagac
ttttatctcccagaatacaatatttatatcgaacattggggtgtcgatgaacgaggagag
gtggccccttggttcagtcaaacttcggctgagtatcgcgagtcagcgagatggaagcgg
cagcaatttacacagaatgatgaacagacgcttattgaaacgcatgaattcgaacatacc
caggaccgtctcgaagtgattttgcgcgcacgacttgaatcacacggggttttgttagac
cgtctttcatataccgaactcgtcgaagcaacgttcgatcgatacgaacagaagcgtatc
aaacaagaactgaagcaatttatcgatctcgcaaagacgtttcgattagaggccgcggac
attcgcacatcgattgaccacctttcttctcgcagacatgcttttggggaagctggagtc
gcgctgttagaacggtatgaagaccaccttgacgccacgggtcagatcgactacacggac
atggttaatgggggactcaacgcacttgatactgatctaatagaagacgatcaccggttc
gaccatgtgttggtcgatgagtttcaagacctcgccgataaccaacttgcgttaatcgat
cggatgactggtcctgatagcgctcgactcttctgtgtcggtgatgattggcaaagtatt
ttctcatttagaggtgcagacgtgaacagattcgttgagttcgaagaaaccttcggtgat
gtcactcgaacacgcctgaaagaaaattaccggtgcccagaaacggtcgtcactgctgga
aacgatctcatcgaaataaatgaccaacagatagacaaacgcgtgaattcgaactcaggg
gttgataccaccccactgctgcacgaacttgatgggtcggactatattggatatgagtat
cagctccgtgattacgttcgagaactcgttgaatcatacttagagaagggggcttcaccg
gaagacattatgattctctgccggtacgaggccggttcatatctcgatataatcagagag
ggacttcgatcgctggataatcatggttatattccgaataaagtatcggaaaatatatct
attaacacgattcacaaagcaaagggccgggaagcgcgccacgtcattcttgtccatgca
gtagaaggggacctaggattccctgctgttgatcatagtaccaatctacttgctccagtt
caacccatgtcagttgattctcttgccgaagaacgacgcttattttacgtttctatgact
cgaagttccggaacactcgacattatcacacgctctgggaaagaatctcgattcatcact
gagatcaggccccatctggaatcagcttggaatggaaactcaattgcggagatgcgaggc
gaggagactcggacaagtataacagcgaaagcgcgaaaattaaaggcaaactcgcacccc
acgatgcgtcaaagtggtgtattggaagacccgacaggcgcagtacggtttatcacgtgg
gcagatggcggccagaaacttctcgaccagatgcagtactatgagttccaaggcatatat
gcttctaattatgagggtaacccacaactagaaataaaatcagatacaatcatccaacaa
attgagccgccggacgtaccgacaagcgatattgaacctcagaccctggattga

DBGET integrated database retrieval system