Halorhabdus tiamatea: HTIA_p3009
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Entry
HTIA_p3009 CDS
T02781
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hti
Halorhabdus tiamatea
Pathway
hti03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hti00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HTIA_p3009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hti03021
]
HTIA_p3009
Transcription machinery [BR:
hti03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HTIA_p3009
Prokaryotic type
Archaeal type
TFB
HTIA_p3009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR_2
RB_B
UPF0547
DZR
PHF5
Zn_ribbon_6
DUF7129
Motif
Other DBs
NCBI-ProteinID:
CCQ35111
UniProt:
S6D9F3
LinkDB
All DBs
Position
pHTIA:complement(240937..241863)
Genome browser
AA seq
308 aa
AA seq
DB search
MATRDIYESGFDEDVRTESSANQCPECDGQVTTNAVETVCEDCGLVIDEQRIDHGPEWRA
YDDEECERTGAPLTAARHDRGLSTEIGRGTDAKGNEISGQKRRRLARMRREQTRGRWRSK
AERNLAHGLGEVRRLASALELSDSVRDQACQLFRSAQNEDLLRGRSIEAIAAASVYGACR
CNGLSRLVDDVSEMARLAESRVTNAYKTLNEELGLPAEPVSPSMFVPRLASDLECPDEIR
QRARALAEQAEERGVTTGVHPAGFAAACLYKAGREEGRWLTQSEAADVANASKATVRAHR
DTLEERVA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccagagacatctacgagagcggattcgacgaagacgtccgaacggaatcgagt
gcgaaccagtgtcccgagtgcgacggccaggtcaccacgaacgcggtcgaaacggtctgc
gaggactgtgggctggtcatcgacgaacagcgcatcgatcacgggccggagtggcgggcg
tacgacgacgaggagtgcgagcgaacgggtgctccactcactgcggcccgccacgatcgc
ggcctgtcgacggagatcggtcgcggcaccgacgcgaaggggaacgagatctctgggcag
aagcgacggcgactcgcgcggatgcgccgtgagcagacccggggtcgctggcggtcgaaa
gcagaacggaatctcgctcacggactgggcgaggtgcgtcggttggcgagtgcgctcgag
ctctccgattcggttcgcgaccaggcgtgccagctcttccggagcgcccagaacgaggat
ctgcttcgaggcagatccatcgaggccatcgccgcggccagcgtctatggagcctgccgg
tgcaacggcctctcgcggttagtggacgacgtcagcgagatggcccgcctcgcggagtca
cgagtcacgaacgcgtacaaaacgctgaacgaagagctgggcctccccgctgagcccgtc
tcccccagcatgttcgtgccgcgcctcgcctcggacctcgagtgtccggacgaaatccga
cagcgggcccgagccctcgcggaacaggccgaggagcgcggcgtcacgacgggcgtccat
ccggccgggttcgccgcggcctgcctctacaaggccggtcgcgaggaggggcgatggctg
acgcaatccgaggccgcggacgtggcgaacgcctcgaaggcgactgttcgggcacaccgg
gatacgttggaggaacgggtcgcctga
DBGET
integrated database retrieval system
