Hydrogenophilus thermoluteolus: HPTL_0415
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Entry
HPTL_0415 CDS
T05630
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
htl
Hydrogenophilus thermoluteolus
Pathway
htl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
htl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPTL_0415 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
htl03021
]
HPTL_0415 (rpoA)
03400 DNA repair and recombination proteins [BR:
htl03400
]
HPTL_0415 (rpoA)
Enzymes [BR:
htl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPTL_0415 (rpoA)
Transcription machinery [BR:
htl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPTL_0415 (rpoA)
DNA repair and recombination proteins [BR:
htl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPTL_0415 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BBD76683
UniProt:
A0A2Z6DW65
LinkDB
All DBs
Position
442393..443382
Genome browser
AA seq
329 aa
AA seq
DB search
MPFESYLTPRSVQIEMLSPVTTRITLEPFERGFGHTLGNALRRVLLSSLRGFAPTEVRIT
GVLHEYSALEGVREDVVDLLLNLKGVVFCLHDRDEAIVRLEVVGPAVVKAGDFALPHGVE
VINEEHVIAHVEEGGRLEMEVVVEAGRGYVPSSSRDSKVIGGIAMDASFSPVRRVAYAVE
SARVEQRTDLDRLVLEVETNGAVDGVELVRQAAKVLIEQFQVFANLEGQEEAAAAEAEAT
IDPILLRPIDELELTVRSANCLKAENIYYVGDLIQKTEQELLKTPNLGRKSLNEIKSVLA
AHGLSLGMKLDNWPPAGLVRADADKQKEV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttgaatcttatttgaccccgcgttcggttcagatcgagatgctgtcgccggtg
acgacacgcatcacgttggaaccgttcgagcgcggttttggccatacgctgggaaatgcg
ctgcgccgtgttctgctctcttctctgcgcggttttgcgccgaccgaggtgcgcatcacg
ggtgtcctccatgagtacagcgcgctcgaaggtgtgcgtgaggacgtcgtcgatctgttg
ctcaacctcaaaggggtggttttttgccttcacgaccgggacgaagcgatcgtccgtttg
gaagtggttggccccgcagtggtgaaagcaggcgactttgcgttgccccatggcgtcgag
gtgatcaatgaagagcatgtgatcgcccacgtcgaagaaggggggcgcctggaaatggaa
gtggtcgtcgaggcgggccgtgggtacgtaccgtcaagcagccgtgacagtaaggtgatc
ggcggtattgcgatggatgcttccttttcgccggtgcgccgtgtcgcgtacgcggtggaa
agtgcccgtgtcgagcagcgcaccgacctggatcgcctggtgctggaggtcgaaaccaac
ggtgcggtcgatggggtcgagttggtgcgtcaagccgcgaaggtattgatcgagcaattc
caggtttttgccaacctcgagggacaagaagaagcggcagcagcggaagcggaagcgacg
atcgatccgattttgctccgtccgatcgacgagctcgaactgaccgtgcgttctgccaat
tgcctcaaagccgaaaacatctactatgtgggtgacttgatccagaagacggagcaagag
ctgctcaagacccccaatttgggtcggaagtcgctcaacgaaatcaaatcggtacttgcg
gcgcacgggctctccttggggatgaagctggacaattggccgcctgctgggcttgtgcgt
gcggatgccgacaaacagaaggaagtgtga
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