Hydrogenophilus thermoluteolus: HPTL_0654
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Entry
HPTL_0654 CDS
T05630
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
htl
Hydrogenophilus thermoluteolus
Pathway
htl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPTL_0654 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htl03019
]
HPTL_0654 (rhlE)
Enzymes [BR:
htl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPTL_0654 (rhlE)
Messenger RNA biogenesis [BR:
htl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPTL_0654 (rhlE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
ERCC3_RAD25_C
PAPA-1
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBD76922
UniProt:
A0A2Z6DWZ0
LinkDB
All DBs
Position
complement(693359..694759)
Genome browser
AA seq
466 aa
AA seq
DB search
MRFADLGLRPELLRAVEELGYEEPTPIQAKAIPVLLAGRDLLGAAQTGTGKTASFTLPIL
ERRAPFANRSPSPARHPTRALILAPTRELVLQVAEAVAQYGKYLPLRSTAIFGGVDFKAQ
VEALRQGVEIVIATPGRLLDHLEQKTVRLNQVAFLVFDEADRMLDMGFLPDIRRIVEHLP
ATRQTALFSATFSPAIRKLAEQWLHDPVTVEVARRNTVSETIEHKVFWVAQEQKRHALLQ
LLHDREGQVLVFVDTKVACGRLTAFLQRNKVNAQAIHGDKSQQQRLETLEAFRDGKLRVL
VATDVAARGLDIEGLPFVVNFALPPNPEDYIHRVGRTGRAGHTGIAISLVDPSEEERLEA
IEKLLKQKIPGEKWESPAAPARPEKRERVRDRRSPKAQMAVESDAMPTVVRDEIPATWRG
AQQRTDAGDPTQPFDWQTMEALWGGRRRDPVPVLLGGSGRRESAEA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttgctgacttggggctgagacccgaactgctgcgcgcagttgaagaattgggc
tacgaagaacccacgccaatccaagcgaaagcgatcccggtgttgctcgcggggcgcgac
ttgctgggcgccgcccaaacgggaacgggcaaaacagcaagcttcacactgcccattttg
gagcgccgtgcacccttcgccaatcgctcacccagcccggcgcgccacccgacccgcgcg
ctcatactggcgcccacgcgagagctggtccttcaggttgccgaagcggttgcccagtac
ggaaaatacctgccgctcagaagcaccgcgattttcggaggcgtcgacttcaaggcgcaa
gtcgaagcgctgcgccaaggggtggagatcgtgatcgccacgccgggacgactcctcgac
catctggaacagaaaacggttcgcctcaatcaggtggcgttcctggtgttcgacgaagca
gaccgcatgctcgacatgggatttctccccgatattcgccgcatcgtcgagcatctgccc
gcaacccgccaaacagcccttttttctgccaccttttcacccgcgatccgcaaattggcg
gaacagtggctccacgaccccgttaccgtcgaggtcgcccgccgcaatacggtgagcgaa
accatcgaacacaaggtcttctgggtcgcccaagagcaaaaacgccacgcgctcctgcag
ctgttgcacgaccgggagggccaagtactggttttcgtcgacaccaaagtggcgtgcggc
agactcacggcattcttacagcgcaacaaagtcaacgcccaagcgatccacggcgacaag
agccagcagcaacgtctggaaaccctcgaagcgtttcgtgacggcaaattgcgcgtcttg
gtcgcgaccgatgtcgccgcgcgcgggctcgacatcgaagggctgccgttcgtcgtcaat
tttgcgcttccgcccaatccagaagattacatccaccgggttggccgaaccggccgtgct
ggtcacacgggaatcgcgatctcgctggtcgaccccagcgaagaggagcgattggaagcg
atcgaaaagcttctgaaacagaaaatcccaggagagaaatgggagtcccctgcagccccg
gcgcgtcccgaaaaacgggaacgggtgcgagaccgccgttccccgaaggcccaaatggcg
gtggaaagcgacgcgatgccaacggtggtccgcgacgaaattccagcaacgtggcgaggg
gctcaacaacgaacggatgcaggagaccctacgcaacctttcgactggcagacgatggaa
gcgctctgggggggacgccgccgcgaccccgtcccggttttgctcgggggctctggtcgc
cgtgagtcggccgaagcttga
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