Hydrogenophilus thermoluteolus: HPTL_1093
Help
Entry
HPTL_1093 CDS
T05630
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
htl
Hydrogenophilus thermoluteolus
Pathway
htl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
htl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPTL_1093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htl03400
]
HPTL_1093
Enzymes [BR:
htl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HPTL_1093
DNA repair and recombination proteins [BR:
htl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HPTL_1093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
Helicase_RecD
AAA_22
UvrD-helicase
AAA_16
UvrD_C
SLFN-g3_helicase
AAA_28
nSTAND3
PIF1
DEAD
AAA
ATPase
SH3_13
T2SSE
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
BBD77357
UniProt:
A0A2Z6DY24
LinkDB
All DBs
Position
1161575..1163422
Genome browser
AA seq
615 aa
AA seq
DB search
MEPQSETTQSEREREETATTILARHLAQTFQAVSSPPAGADRNVVDEAERAGKAVERFVE
ALLEALAEGNTALQLTAETAAWLRQQPWVSDGSRFAPVILTGTLAQFHRYWLAEQTLAAF
FDARVGIGANSQGLRKADIDPAETAPLDPEFRAAADAFALEAEKRTVIARALTLPVALLT
GGPGTGKTTTLAWFLAAALRRHPELRIALAAPTGKAAQRMGEALTHVLPELPLSDAAKAC
LCALTPLTLHRLLGIGRRPEPSYHAQRPLPYDLVVVDEASMVDVLLLAKLVRALPATAQL
LLIGDPNQLASVEAGNVLADLVARYPNCHLPLSRSHRFTAAIGAFADAVIAGNGDAAWQM
LSPADEAVLRSLFASHEFPKDLPPLRLQPTAAELFAAIDRGFQSVLAHLAVAPNGSDFSS
VAAYVRTLFARYRVFRLLSPLRHDRRYGVRALNARIAEHWHRAHRIPFVGTGAGRPILLG
QPITIESNDYSLSLFNGDQGVVFPWLGTLFAWFLDADAPHGVRPVPLAQLPHWESAWALT
VHKAQGSEFDAVLLVLPAETVTVATRELLYTAITRAKRGFVFWGTEDAFRAAVANRTVRV
SGLGGAVVGSGASAR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgcaaagcgaaacgacccaatcggaacgggaacgcgaagagacggcaaccacg
attttggcgcgccacctcgcccaaaccttccaggctgtttcctctcctcccgctggtgcg
gatcgaaacgtggtcgatgaagcggagcgcgcgggcaaggcggtggaacgcttcgtggag
gcgcttttggaagcccttgccgagggcaataccgctctccagttgactgccgaaacggcc
gcttggttgcggcaacaaccgtgggtttcggacggctcgcgattcgcgcctgtgatcctt
acggggacgcttgcgcagtttcaccgctactggctagcggaacagaccctggccgctttt
ttcgacgcgcgcgttggcattggcgccaattcccaagggttacggaaagcggatatcgac
cctgccgagaccgcgccgctcgatcccgaatttcgtgcagccgccgatgcgttcgcgctc
gaagcggaaaagcgcacggtgatcgcgcgcgcgctcacactgccggtggccctcttgacc
ggagggccgggcaccggcaagacgacgacgctcgcctggttcttggccgcagcgcttcgg
cgtcatcctgagttgcggatcgcgctcgctgcgcccactgggaaagcggcgcaacggatg
ggggaagcattgacgcacgtgttacccgaattgccgctttcggacgctgcgaaagcatgt
ctttgtgcgctcaccccactcacgctgcaccgtctcttgggcatcgggcgcagacccgaa
ccgagctaccacgcgcaacggccactgccttacgacctggtcgtggtcgatgaagcgtcg
atggtcgatgtgctgcttcttgcgaaactggtgcgcgcgcttcccgctaccgcgcagctt
ctgcttattggagaccccaaccaactcgcctccgtggaagccggcaacgtcttggccgat
ctcgtcgcgcgctacccgaattgccacctgcctctttcccgcagccaccgcttcaccgcc
gcgattggggcgtttgcggatgcggtgatcgcgggcaacggtgacgcggcgtggcagatg
ctgtcccctgcggacgaagcggtgttgcgctctcttttcgcgtcgcatgagttccccaaa
gatcttcctccattgcggctccaaccgaccgcagcggaactgttcgcggcgatcgatcgc
ggatttcaaagcgtgttggcccaccttgccgttgcgcccaacggaagcgacttttcgagc
gttgccgcgtacgtgcgcaccctctttgcgcgctaccgtgtctttcggctgctcagtccc
ttacgccacgatcgccgctatggcgtgcgtgccctcaacgcccgaattgccgaacattgg
caccgcgcgcaccgcatcccgttcgtcggtacgggcgcgggaagaccgatcctgcttggg
cagccgatcacgatcgaaagcaacgactacagtctttccctcttcaatggcgaccaaggg
gtggtctttccgtggctagggacgctttttgcctggtttctcgacgccgacgcgccgcac
ggggtgcgccccgtgccgcttgcgcaattgccccattgggagagcgcgtgggcgctcacc
gtacacaaagcgcaagggtcggaattcgacgccgtgttgctcgtcttacctgccgagacc
gtcaccgtagcgacgcgcgaactgctctataccgcgatcacccgggcgaaacgcgggttc
gttttctggggtaccgaggacgcttttcgcgccgcagtcgcgaatcggacggttcgagtc
agtggtttgggtggcgcggtggttggatctggtgcttctgcacgttga
DBGET
integrated database retrieval system
