Hydrogenophilus thermoluteolus: HPTL_1443
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Entry
HPTL_1443 CDS
T05630
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
htl
Hydrogenophilus thermoluteolus
Pathway
htl03030
DNA replication
htl03430
Mismatch repair
htl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
htl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPTL_1443
03430 Mismatch repair
HPTL_1443
03440 Homologous recombination
HPTL_1443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
htl03032
]
HPTL_1443
03400 DNA repair and recombination proteins [BR:
htl03400
]
HPTL_1443
Enzymes [BR:
htl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPTL_1443
DNA replication proteins [BR:
htl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPTL_1443
DNA repair and recombination proteins [BR:
htl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPTL_1443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
BBD77705
UniProt:
A0A2Z6DZP2
LinkDB
All DBs
Position
complement(1529942..1533472)
Genome browser
AA seq
1176 aa
AA seq
DB search
MSTQAHPFVHLRLHTEFSIREGIVKIPDAVKRAAAEGMPALAITDVMNVFGLVKFYKACR
SAGVKPIIGVDARVAHPDAPNDPERALELLLIVRNRDGYRQLCELVSRAWLENQHRGQAL
LRPEWLTRETCAGLMALSGGARGVLAPALLAGETRGAKAALAHWAGCFPDGAFFVEVQRA
GLPNEAEYLAAAVPFAAELGVPVVATHPIQFLRPEDFTAHEVRFCIAEGYVLNDPNRPRP
FTEAQYFLSAEEMADRFADLPEALENTLLIAQKANLTITLGKSFLPAFPTPEGMSLDEFF
ISEAKRGLAARLEERFPDPEERERERPRYEQRLAFECDTIIQMGFPGYFLIVADFINWAK
QNDVPVGPGRGSGAGSLVAYALRITDLDPLSYALLFERFLNPERVSMPDFDVDFCQEKRY
RVIDYVRRRYGAQAVSQIATFGSMASKAVVRDVGRVLGLPYGLCDRISKLIPTEGVKPVS
LAKALELEPQLQELMEDPQDGEAIRQLFELAQPLEGLTRNVGMHAGGVLIAPGKITDFCP
LFVQEGDDPSPVSQFDKDDVEAVGLVKFDFLGLRNLTIIREALDQIERLTGARPDLARMG
FDDPQTYQLLRDANTTAVFQLESEGMKKLLKKLQPDRFEDIIAVLALYRPGPLGSGMVDD
FILRKQGKQAIDYFHPDLKACLEPTYGVIVYQEQVMQIAQIIGGYTLGAADLLRRAMGKK
KPEEMAKHREIFRQGAIERGYDEALAMRLFDLMEKFAEYGFNKSHTAAYAVVTYQTAWLK
RHHPAPFFAATLSSDMDDTDAVKTFFDDACANGLTVLPPDVNVSEYRFQAIDAATIRYGL
GAIKGVGEPAANAIVTERQQHGPFHDLFDLVSRVDRRVVNRRVLEQLVRAGALDTLPGHT
HLRAPDGLCDRARLFASVGLALEVAEQRAASAQQCGLFDDEPEANGSYTPEFPAVRPWTE
RERLKEEKLAIGFFLSGHPFTAFAAELRQTVPTKLADLAPSRDAVWVCGVVVELRTKMGA
RGRMAFVTLDDGSEPCEVLFYREVYDAVRQIVVVDEPLVVRVKVAPDDYSGGVRVVAEEA
LSLPQWRARQLKAIEITIPESVVDSPVSAQRLSETIEAFRVPSASPEGAKIEMRVTFSEG
AVVALRAARDAIRVKPEDALLTELRGFPEVNVALRY
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcaggcgcatcctttcgttcatcttcggttgcataccgaattttcgattcgc
gaagggatcgtcaaaatcccggacgcggtgaaacgggctgccgccgaagggatgcccgca
ctggcgatcaccgacgtgatgaacgtctttgggctggtcaagttttacaaggcgtgccgc
agcgctggggtgaagccgattatcggggttgacgcccgtgttgcccacccggatgcgccg
aatgaccccgaacgtgcccttgaactgctcttgatcgttcgcaaccgcgacggctatcgg
cagctgtgcgaattggtttcacgcgcctggctcgagaatcagcatcgtggccaggcgctc
ttgcgcccggagtggctcactcgtgaaacgtgtgccggactcatggcgctttcgggtggc
gcccgtggcgtgctggcgccagcattgttggcaggagagacacggggggcgaaagcagcg
ctggcccactgggccgggtgttttcccgacggcgcgttctttgtcgaggtgcagcgtgcg
ggtctccccaacgaagcggaatacttggcggcagcggtcccttttgcggcagagttgggt
gtaccggtggtcgcaacacatcccatccagttccttcgcccagaagatttcaccgcccac
gaggtgcggttctgcatcgccgaagggtatgtcctcaacgatcccaaccgtccgcgcccg
ttcacagaagcgcagtatttcctctccgccgaggagatggcagatcgttttgccgatctc
ccggaagcgctcgagaatacgctcctcattgcgcaaaaggcgaatttgacgatcacgttg
ggcaagagctttttgccggcgttcccgaccccggaagggatgtcgctcgacgaattcttc
atcagcgaagcaaagcgtgggctcgcggctcgactcgaagagcgctttccggatccggaa
gagcgggagcgggagcgcccccgttacgagcaacggctggcgttcgagtgcgacaccatc
atccagatggggtttcccgggtacttcttgatcgttgccgacttcatcaactgggcgaaa
caaaacgatgtgccggtgggaccgggccgcggttcgggtgcgggctcgctcgttgcttat
gcgctgcggatcaccgatctcgacccactctcctatgcgctccttttcgaacggtttttg
aacccggaacgggtctcgatgcccgacttcgacgtcgatttttgccaggagaagcgttat
cgagtgatcgactacgtgcgccgaaggtatggcgctcaagccgtgagccagatcgcgacg
ttcggctcgatggcgtccaaagcggtggtacgcgacgtcggccgcgtgttgggtcttccc
tatgggttgtgtgaccggatttcgaagctcattcccaccgaaggggtgaagccggtttcg
ctggcgaaagcgctcgaactggagccccagcttcaagagctgatggaagacccccaagac
ggggaagcgattcgccaactgttcgaattggcgcaaccgctggaaggattgacgcgcaac
gtcgggatgcacgcgggtggggtactgatcgcaccggggaaaatcaccgatttttgccca
ttgttcgtgcaagagggcgatgaccccagcccggtgtcgcagttcgacaaagacgacgtc
gaagcggttgggttggtgaagttcgattttctggggctcagaaacctcacgatcatccgc
gaggcgctcgatcagatcgaacgcttgaccggggcacgccccgacttggcgcgcatggga
ttcgacgatcctcaaacctaccagctcctgcgtgacgcgaataccaccgcggtcttccag
ttggaatccgaagggatgaagaagctcctcaagaagcttcagcccgaccgtttcgaggac
atcatcgcggtgctcgcgctctatcgccccggtccgttgggctccgggatggtcgatgac
ttcattctccgcaagcaaggcaagcaggcgatcgactacttccacccggacctaaaggcg
tgtctcgaacccacctacggtgtgatcgtctatcaagagcaggtgatgcagatcgcgcag
atcatcggcggctacaccttgggggcggccgacctcttacggcgcgcgatggggaagaaa
aaaccggaagagatggcgaaacaccgcgaaatcttccgtcaaggagcgatcgagcgcggc
tacgacgaagcgctggcgatgcgcctcttcgatttgatggagaaatttgccgaatacggg
ttcaacaaatcgcacaccgcggcgtacgcggtggtgacctaccagaccgcgtggctcaag
cgccaccatcctgcgcccttctttgccgcgacgctctcgtccgacatggacgacaccgat
gcggtgaaaacctttttcgacgatgcctgtgccaacggcttgacggtattgccgcccgac
gtgaatgtttcggagtaccgttttcaggcgatcgacgcggcaaccatccgctatggcttg
ggtgcgatcaagggggtaggggagccggcggcgaacgcgatcgtcacggaacggcagcaa
catggcccatttcacgatctgttcgatctggtgagccgggtcgaccggcgggtggtcaac
cgccgagtactcgagcagttggtgcgcgcgggggcgctcgatacgcttcccggccacacc
catttgcgtgcccccgacggattgtgtgaccgggcacggctattcgcgagtgtgggactc
gcgctcgaagtggcggaacagcgggcagcgtcggcgcagcagtgcgggctcttcgacgac
gaacccgaggcgaacggatcgtacacccccgaatttcccgcagtgcgcccgtggaccgaa
cgggagcggttgaaagaggagaaattggcgatcggtttctttctttccggccaccccttc
accgcgtttgcggcggagttgcggcaaaccgtccccaccaagttggcggatttggctcca
agccgcgacgccgtttgggtgtgtggcgtcgtggtcgagctcagaaccaaaatgggggcg
cggggtcggatggcgttcgtgaccctcgacgatggcagcgaaccgtgcgaggtgcttttt
tatcgggaagtctatgacgcggtgcggcagatcgtggtcgtggacgaaccgctcgtcgtg
cgggtcaaggttgcgccggacgactatagcggtggggttcgggtcgttgccgaagaggcg
ctctcgcttccccaatggcgggcgcgacaactcaaggcgatcgaaatcaccattcccgaa
tcggtggtcgattctccagtttcggcgcaacggttgagcgagacgatcgaagcttttcgc
gtgccgagtgcgtcgcccgaaggggccaaaatcgaaatgcgcgtgacgttttccgagggc
gcagtggtggccctgcgcgccgcacgtgacgcgattcgggtcaaacccgaggatgcgctc
ctcacggaattgcgcgggttcccagaagtgaacgtcgcgttgcgttactga
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