Hydrogenophilus thermoluteolus: HPTL_1796
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Entry
HPTL_1796 CDS
T05630
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
htl
Hydrogenophilus thermoluteolus
Pathway
htl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPTL_1796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htl03019
]
HPTL_1796
03400 DNA repair and recombination proteins [BR:
htl03400
]
HPTL_1796
Enzymes [BR:
htl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPTL_1796
Messenger RNA biogenesis [BR:
htl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPTL_1796
DNA repair and recombination proteins [BR:
htl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HPTL_1796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
BBD78054
UniProt:
A0A2Z6DZS2
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All DBs
Position
1896381..1897985
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AA seq
534 aa
AA seq
DB search
MSEAQLRDRPPASAPADGADPTLAERARRLLRTRFGLASFRPQQEEIVCHIAAGGDALVL
MPTGGGKSLCYQLPALLRAGLAVVFSPLIALMDDQVRALTARKIPAAALHSGLDEAAQDA
VLDAAFEGRLKLLFVAPERLPTPRFLALLDALHERNRLALFAIDEAHCVWQWGHDFRPEY
LQLALLATRYPTVPRVALTATADHVAREEIIARLNLHRARTFLTSFDRSNLFYAMTPRSG
DGKRQLLAALRARPLEGSSIVYCGSRAKTERIAAWLAAHGVPALAYHAGLDAATRRARQH
QFLHRDGMVMVATIAFGMGIDKPDVRFVAHLDLPRTLEGYYQETGRAGRDGAPAFAQLFW
RGEDAARWRIAIDTNTQLLPEQRSAAWARLDALAQLVLASGCRRQPLLAYFGERIGPCGR
CDHCLAPPKRWDAREAAQMALSAVYRTGQRHGAQLLVDVLRGNATSRVVAAGYDRIKTFG
VGVRIPPERWHRLFQALLLTGALTLTDAGGYALTERARPLLKGAAPFWLPLPHN
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaagcgcagttgcgtgaccgtccgcccgcctctgccccggcggacggggccgat
ccgacgctcgcggaacgggcgcggcgcttgctgcgcacgcgcttcggtcttgcgtctttc
cgcccccagcaagaggagatcgtgtgccatatcgccgcaggcggcgatgcgctcgtcttg
atgccaaccggaggcggcaaatcgctctgctaccaactgcctgcgttgctgcgcgcgggg
cttgcggtcgtcttctctccgctcattgcgctgatggacgatcaggtacgcgcgctcacc
gcacgaaagatccctgccgcagcgctccattccgggttggacgaagcagcacaggatgcg
gtgctcgacgcggcgttcgaagggcggctcaaactcctgttcgtcgctcctgaacgcctc
cccacgccgcgttttttggcactcctcgacgcgctccacgaacgcaaccggctcgcgctt
tttgcgatcgacgaggcgcattgcgtctggcagtggggacacgactttcgccccgagtat
ctgcagttggcgcttttggctacccgctaccccacggtgccgcgcgttgcgctcaccgca
accgccgaccacgtggcgcgcgaagagatcatcgcccggctcaacctccaccgcgcccgc
accttcctcaccagtttcgaccgcagcaacctcttttacgcgatgacaccgcgcagtggc
gacgggaaacggcagcttcttgccgcattgcgcgcgcgcccactggaaggcagcagcatc
gtctattgcggcagccgcgcgaagaccgaacggatcgccgcctggcttgctgcgcatggg
gtccccgcgcttgcctaccatgccgggctcgacgctgcgacgcggcgcgcccgacagcac
cagttcctacaccgcgacggcatggtgatggtcgcgacgatcgcatttggcatgggaatc
gacaaaccagacgtgcgttttgtcgcccacctcgacctgccccgtacgctggaagggtat
tatcaagagactggccgcgctgggagagacggcgcgcctgcgttcgcgcagcttttttgg
cgcggcgaagacgcagcgcgttggcgcattgcgatcgacacgaacacgcaattactcccc
gaacaacgaagcgctgcgtgggcgcggctcgacgcgctcgcccagctcgtgctcgcctcc
ggctgccgccgacagccgcttcttgcctatttcggggagcgaatcgggccgtgcggccgc
tgtgaccattgcctggcaccgccgaaacggtgggacgcccgcgaagcggcccaaatggcg
ctctcggcagtctatcgcactggccaacgacacggcgcgcagcttctcgtcgacgtcttg
cgcggcaacgcaacgagccgcgtggtcgccgccgggtacgaccgcatcaaaacctttggt
gtcggcgtacgaattccgcccgaacggtggcacaggctcttccaagccctgttgctcaca
ggggcgctcacgcttactgacgccggtggctatgcgctcaccgaacgggcacggccgctc
ctcaaaggagcggcccctttctggttgccccttccccacaactaa
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