KEGG   Hydrogenimonas thermophila: RZR91_00860
Entry
RZR91_00860       CDS       T09456                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
htm  Hydrogenimonas thermophila
Pathway
htm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:htm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RZR91_00860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:htm03019]
    RZR91_00860
Enzymes [BR:htm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     RZR91_00860
Messenger RNA biogenesis [BR:htm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     RZR91_00860
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 P-loop_SecA UvrD-helicase AAA_22 HEM4
Other DBs
NCBI-ProteinID: WOE70146
LinkDB
Position
166354..167622
AA seq 422 aa
MSFETLNLNPQIQRAIKEVGYSEATPIQAEAIPAILDGKDLLAAAQTGTGKTAAFTLPML
QKLSLQKSSGKRYVRALVLTPTRELAAQVHQSVRTYGKYLKLKSAEIYGGVSIQPQTRAL
RNGVDILVATPGRLLDHVNQGHIDLSKVEFLVLDEADRMLDMGFIHDIKKIISDLPHFKQ
SLLFSATFSDEIKRLSKSILQDPVMIKVAADNTTADRIKQTVHPVDKSKKADLLSYLIGK
NNWQQVLVFTRTKHGADKLSKRLAQDGLPSTSIHGNKTQAARMKALKAFKDGRVRVLVAT
DVAARGIDIDKLGQVVNFDLPEVAEDYVHRIGRTGRAGNAGEAYSLVCIDEKHLLHRIEK
LTNRTIEKVMIDGFHPDPSIKSEPVKQRRSQNRRRSFSNRGNQSQNGRSSREGRNFSRRA
NA
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgtcatttgagactttaaacctaaatccacaaatccagcgtgccattaaagaagttggc
tatagtgaagcgacacctattcaagcagaagcaattcctgctattttagatggcaaagac
cttttagctgctgctcagacaggcacaggtaaaacagcagcttttacacttccaatgttg
caaaaactgagccttcaaaagtctagtggtaaaagatatgtaagagcacttgtattgaca
cctacccgtgagcttgcagctcaggtacatcaaagtgtaagaacatacggtaaatatctg
aaactaaaaagtgctgaaatttatggtggtgtaagtattcaacctcaaacaagggctctt
cgtaatggtgttgatattcttgtagctaccccaggtcgtctacttgaccatgtcaatcag
ggtcatattgatttaagcaaagtagagtttctggttcttgatgaagcagacagaatgctt
gatatgggatttatacatgatatcaagaaaataatttcagacttgccacactttaaacag
agtcttcttttctcagcaacattttctgatgagataaagagattaagtaaatctatttta
caagatcctgtaatgataaaagtagctgcagacaatacaacagctgatcgtataaagcag
actgttcatcctgttgacaaatcaaaaaaagcagatcttctttcttatcttataggtaaa
aataactggcagcaggttttggtctttactcgtaccaagcatggagccgataagctttct
aaaagattggcacaagatggtttgccatcaacatctatccatggaaataaaacacaagca
gcacgtatgaaagcacttaaagcttttaaagatggtcgtgttcgtgtattggttgcaact
gatgttgctgccagaggtattgatattgataaacttggtcaggtagtaaattttgatctt
cctgaagtagcagaagattatgtgcatcgtatcggaagaactggtcgtgcaggaaatgca
ggtgaagcctattcattagtatgtatagatgaaaaacatttgttgcatagaatagaaaaa
cttaccaatagaaccatagagaaggtaatgattgatggatttcatcctgatccttcaatt
aaatctgagcctgtcaaacagcgcagaagccagaatagacgaagaagttttagcaatcgt
ggaaaccaaagccaaaatggcagaagcagtcgtgaaggcagaaattttagcagacgtgct
aacgcataa

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