Hydrogenimonas thermophila: RZR91_00940
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Entry
RZR91_00940 CDS
T09456
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
htm
Hydrogenimonas thermophila
Pathway
htm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
htm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RZR91_00940 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
htm03021
]
RZR91_00940 (rpoB)
03400 DNA repair and recombination proteins [BR:
htm03400
]
RZR91_00940 (rpoB)
Enzymes [BR:
htm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RZR91_00940 (rpoB)
Transcription machinery [BR:
htm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RZR91_00940 (rpoB)
DNA repair and recombination proteins [BR:
htm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RZR91_00940 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RnfC_N
Spo7
Motif
Other DBs
NCBI-ProteinID:
WOE70157
LinkDB
All DBs
Position
175207..179367
Genome browser
AA seq
1386 aa
AA seq
DB search
MLNNLKSGNRLRVDFAKTPQEIDVPNLLQLQQSSYDNFLMINEKDRSNSGIEHVFRSIFP
IHDPQNRLTLEYVGSEISSPKYTVRECMERGLTYAVSLKMKIRLTLWERNDKTGEKTGVK
DIKEQSIFVRDIPLMTDRTSFIINGVERVVVNQLHRSPGVIFKEEEAATGTNKLLYTAQI
IPDRGSWLYFEYDAKDILYVRINKRRKIPVTILFRALGYSKQDILKLFYPLMEIRIKNSK
FLMPFKPENFSGRLEYDVKDEDGNLIIAAGKRLSAKRAKKLVEEGLEWVEYPVDILIERH
LAEPIIDQESGEVLLDTLTQLDENKLKKIIDNGIERFVIADDLANGVDQSVINAFNADQE
SLKLLKQTEQIEDENDLSAIRIYKVMRPGEPVTKEAAKAFVKQLFFDPERYDLTRVGRMK
MNHKLGVEVPEYVTVMTDEDIIKTVQYLIRVKNGQGHIDDRDHLGNRRIRAIGELLGNEL
QTGLIKMQKAIRDKMSTMSGNLDELMPHDLINSKMITNTILEFFTSGQLSQFMDQTNPLS
EVTHKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPIETPEGQNIGLINTLASYAKVN
DLGFIEAPYKKVVDGKVTNEVVYMTATQEEGLTIASASTELDEDGKIVEDLIEARRDGEI
LLVDRKEVDYIDLNPLMVVGVAASLIPFLEHDDANRALMGSNMQRQGVPLLIPDAPVVGT
GVEKLIARDAWVSIKAKRAGIVEKVDAKNIYILGEDENGAFIDHYSLQKNMRTNQNTTFT
QVPIVKKGDRVEAGQVIADGPNMDQGELAIGKNIMVAFMPWNGYNFEDAIVVSEKLIRED
TFTSVHIYEKEIEARELKHGVEEITRDIPNVREEDLSHLDESGIVKIGTYIKPGMIMVGK
VSPKGEVKPTPEERLLRAIFGEKAGHVVNKSLYCPPSMEGIVIDVKIFTKKGYEKDQRAI
RAYEEEKAELDREHHDKLLMVDREEMLRIYAFLSNAELESDVEVNGKTFKAGEKIDRSVL
EGVNRFALNAIAKHFNEDIRNQYEALKNHFQKEKRKLREEHEEKLNILEKDDILPNGVTK
LVKVYIATKRKLKVGDKMAGRHGNKGIVSNIVPEMDMPYLEDGTPVEIILNPLGVPSRMN
IGQILEVHLGLVGKRLGQQIQAIFDEKREDFVQQLRAKMTEIASVAKLMNAKETLEKMSD
EELIKYARDWSKGVRFATPVFESVDAEEFAKLFEMAKIDSDGKCVLYDGKTGERMKERVN
VGYMYILKLHHLVDEKMHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAANV
LKEMLTIKSDDVDGRVRAYKALTRGEKVPPAGIPETLFVLGKELQALALDVELLDEEEDN
EETGTN
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacaatcttaaatcaggaaaccgcttacgtgttgattttgctaaaactccacaa
gagattgatgttcccaacctcttgcaacttcaacaaagcagttatgacaactttttgatg
atcaatgaaaaagatcgatccaatagtggaatcgaacatgttttccgatctatcttccca
attcacgacccacagaaccgactaacacttgaatatgttggaagtgaaataagcagtcca
aagtatactgtacgtgaatgtatggaacgtggtctgacttatgctgtttctctaaaaatg
aaaatacgcctcactttgtgggaacgtaatgataagacaggtgagaaaaccggtgtcaaa
gatatcaaagagcaatctatatttgttcgagatattccacttatgaccgatcgaacttca
tttatcatcaacggcgtagaacgcgttgttgtaaaccagcttcatagaagccctggtgtt
atatttaaagaagaagaggctgctacaggcacaaataaacttctttatactgcacaaata
atacctgaccgtggttcttggctctactttgaatacgatgcaaaagatattttgtatgta
cgtatcaataaacgtagaaaaatccctgttacaattctttttagagctttaggttactct
aagcaagatattttaaaactcttctatcctttaatggaaatacgcattaaaaacagcaag
tttttaatgcctttcaaacctgaaaacttctctggacgcttagagtatgatgttaaagat
gaagatggcaatctaatcattgctgcaggaaaacgtctatctgcaaaacgtgcaaaaaaa
ttggttgaagaaggtttggagtgggtcgaatacccggttgacattcttattgaacgtcat
cttgctgaaccaataattgatcaagagagtggagaggttcttctagatacattaacacag
ttagatgaaaacaagttaaagaaaattatagataacggtattgagagatttgtaattgct
gatgacttggcaaatggtgtcgaccagtcagttatcaatgctttcaatgcagatcaagag
agtttgaaacttcttaagcagacagagcaaattgaggatgaaaacgatctttctgcaata
cgcatctacaaagttatgcgtcctggagagcctgtaacaaaagaggcagccaaagctttt
gtaaaacagctattctttgatcctgaaagatacgacttgactcgtgttggtcgtatgaag
atgaatcataagcttggcgttgaagtgcctgagtatgttacagttatgacagatgaagat
atcatcaaaactgttcaatatcttattcgtgttaaaaatggacagggacatatagatgac
cgtgaccacttgggtaacagacgtattcgtgcaattggtgaacttcttggaaatgagttg
caaacaggtctaattaagatgcaaaaagcgattcgtgacaaaatgagcacgatgagtgga
aatcttgatgagttgatgcctcatgacttgatcaactctaaaatgattacaaatacaatt
ttagagttcttcactagtggtcaattgagccaatttatggatcagacaaatccactttca
gaagttactcataaacgtagactatctgcactaggtgaaggtggtcttgtaaaagagcgt
gcaggctttgaagttcgtgacgttcacccaacccattatggacgtatatgtcctattgaa
acgccagaaggtcaaaacattggtcttatcaatacccttgcatcttacgcaaaagtaaat
gaccttggattcatagaagctccatacaaaaaagttgttgatggtaaagtaactaatgaa
gttgtctatatgacagcaactcaggaagaaggtcttactatagcatctgcaagtacagag
cttgatgaagatggtaaaattgttgaagatcttatagaagcacgtcgtgatggtgaaatt
ttactagttgatagaaaagaggttgactatattgatctaaaccctctaatggttgtcggt
gttgctgcaagtcttattccattccttgagcatgacgatgcaaaccgtgcactaatggga
tcaaacatgcagcgtcagggtgtacctcttttaattccagatgctcctgtagtaggaact
ggtgttgaaaaacttattgctcgtgatgcttgggtaagcattaaggcaaaacgagctggt
attgttgaaaaagtagatgcaaaaaatatctatattcttggtgaagatgaaaatggtgca
tttattgatcactactctcttcaaaagaatatgagaactaaccaaaatacaacttttaca
caggttcctattgtcaaaaagggtgatcgtgtagaggctggacaggtaattgcagatgga
ccaaatatggatcagggtgagttggcaattggtaaaaacattatggttgcctttatgcct
tggaatggttacaatttcgaggatgcgattgttgttagcgaaaaattgattagagaagat
acatttacatctgtccacatttatgaaaaagagatcgaagcacgtgaacttaaacatggt
gttgaagagattacacgtgacattccaaatgttcgtgaggaagatttaagtcatcttgat
gaaagcggaattgtcaagattggtacttatatcaagcctggtatgataatggttggtaaa
gtttcaccaaaaggcgaggtaaaaccaactcctgaagagcgccttttacgtgcaattttt
ggcgaaaaagctggtcacgttgtaaacaaatcactctactgccctccatcaatggaaggt
attgttattgatgttaaaatatttactaaaaaaggttatgaaaaagatcagcgtgcaatt
cgtgcttatgaagaggaaaaagctgaacttgacagagaacatcatgacaaactgttaatg
gttgaccgtgaagagatgcttagaatctatgctttcctttctaatgcagagctagaaagt
gatgttgaagtaaatggtaaaacttttaaagcaggtgagaagatagatagatctgtgctt
gaaggtgttaaccgatttgcacttaatgctattgccaaacacttcaatgaagatattcgc
aatcagtatgaagcactgaaaaaccatttccaaaaagagaagcgaaagcttcgtgaagag
catgaagagaagttaaatattcttgaaaaagatgacattcttccaaatggtgttacaaaa
cttgtaaaagtctatattgcaactaagcgtaagcttaaagttggtgacaagatggcaggt
cgtcacggtaacaaaggtattgtctctaatattgttcctgaaatggatatgccatatctt
gaggatggaactcctgttgagataatcttgaacccactgggcgttccttctcgtatgaac
attggacagattttggaagttcacttaggtcttgtcggtaagcgtctaggtcagcaaatt
caagctatctttgatgagaagagagaagactttgttcagcagttacgtgcaaaaatgaca
gagattgcaagcgttgcaaaactgatgaatgctaaagagactcttgaaaagatgagtgat
gaagagctcattaagtatgcgcgtgactggtcaaaaggtgttcgttttgcgactcctgta
tttgagtcagttgatgcagaagagtttgcaaaactgtttgaaatggcaaaaattgacagt
gacggtaagtgtgtgctttatgatggtaaaaccggagagcgtatgaaagagcgtgtaaat
gttggatatatgtatatccttaaactacaccaccttgtagatgaaaagatgcacgcacgt
tcaactggaccatacagtcttgttacacagcagccggttggtggtaaagcactctttggt
ggtcagagatttggagagatggaagtttgggcacttgaagcatatggtgctgcaaacgtt
ctaaaagagatgttgactatcaaatcagatgatgttgatggacgtgttcgagcatataaa
gcattgacgcgcggtgaaaaagttccgccagcaggtatccctgaaaccctgtttgttctt
ggaaaagagctacaggcactcgcacttgatgtagagcttttagatgaggaagaagataat
gaagaaactggtaccaattga
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