Hydrogenimonas thermophila: RZR91_01915
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Entry
RZR91_01915 CDS
T09456
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
htm
Hydrogenimonas thermophila
Pathway
htm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RZR91_01915 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
htm03021
]
RZR91_01915 (rho)
03019 Messenger RNA biogenesis [BR:
htm03019
]
RZR91_01915 (rho)
Transcription machinery [BR:
htm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RZR91_01915 (rho)
Messenger RNA biogenesis [BR:
htm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RZR91_01915 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
Spore_III_AA
AAA_25
S1CSD-TOTE-2
OB_RNR_1st
ATPase_2
Mor
Motif
Other DBs
NCBI-ProteinID:
WOE70339
LinkDB
All DBs
Position
372387..373706
Genome browser
AA seq
439 aa
AA seq
DB search
MSEHSNRNYGNNKNRTHIPVEGYKIEDLRQKSIEDLITIARELGVEHPNELKRQDLMFEI
LKSQVSKGGYILFTGILEITNEGYGFLRAMDANFSNSSNDAYVSSTQIRKFALRNGDVVT
GQVRPPKEQERYYALLKIEAVNYMPVNESKNRPLFDNLTPLYPQEKIKLEYDPIKLTGRV
LDLFTPIGKGQRGLIVAPPRSGKTELMKELAHGITHNHPEVELIVLLVDERPEEVTDMER
CVNGEVYSSTFDLPAQNHVRVAELVIEKAKRRVELGRDVVILLDSITRLARAYNTVTPSS
GKVLSGGVDANALHKPKRFFGAARNIENGGSLTIIATALVDTGSRMDEVIFEEFKGTGNS
EIVLSRNIADRRIYPAIDIIKSGTRKEELLTDPNTLPKIWALRNAMHQMDEVEALKFLYS
KMLKTKNNEEFLSIMNEGA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacactcgaatcgtaactacggaaacaacaaaaatagaactcacatacctgta
gaagggtataaaatagaagacctccgtcaaaagagcattgaagatttaataactattgct
agagagcttggtgttgaacatccaaatgagttgaaacgtcaagatcttatgtttgagatt
ttaaaatctcaggtaagtaagggaggttacattctttttaccggaattcttgagattaca
aatgaagggtatggcttcttgcgtgctatggatgccaacttttcaaactcaagcaatgat
gcatatgtttcaagtacgcagattagaaagtttgcactaagaaatggcgatgttgtaaca
ggacaggtgcgccctccaaaagagcaggaaaggtactacgcccttttaaaaatagaagct
gttaactatatgcctgtaaatgagagcaaaaaccgccctctgtttgacaaccttacacct
ctttaccctcaagagaagatcaagcttgaatatgatcctattaagcttacaggacgtgtt
ttagatctctttactccaataggaaaagggcagcgtggactcattgttgctcctccaaga
agtggtaaaacagagctaatgaaagagcttgcacacggcataactcacaaccatcctgaa
gttgagctaatcgtacttttggttgatgagcgtcctgaagaggttacagatatggagagg
tgtgtaaatggtgaagtttacagctctacatttgacttgcctgcacaaaatcacgtaagg
gtagctgaacttgttatagaaaaagctaaacgacgtgttgagcttggcagagatgttgtt
attttgcttgactccattacaagattagctcgtgcatataacactgtaacaccttcaagc
ggaaaggttctttcaggtggtgttgatgccaatgctctacataaaccaaagagatttttt
ggtgctgcaagaaacattgaaaatggcggaagcttgaccatcatagcaacggcacttgtc
gatacaggaagccgaatggatgaagtaatttttgaagagtttaaaggtactggtaacagt
gaaatagttctaagcagaaatatagctgaccgccgaatttatcctgctattgacatcata
aaatctggtacaagaaaagaggaacttcttacagatccaaatacactgccaaaaatttgg
gcattaagaaacgcaatgcatcaaatggatgaagtagaagctcttaaattcctatattcc
aaaatgctcaagacaaagaataatgaagagtttttgagcattatgaatgagggagcataa
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