Hydrogenimonas thermophila: RZR91_03410
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Entry
RZR91_03410 CDS
T09456
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
htm
Hydrogenimonas thermophila
Pathway
htm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RZR91_03410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htm03019
]
RZR91_03410
03016 Transfer RNA biogenesis [BR:
htm03016
]
RZR91_03410
Enzymes [BR:
htm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RZR91_03410
Messenger RNA biogenesis [BR:
htm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RZR91_03410
Transfer RNA biogenesis [BR:
htm03016
]
Prokaryotic type
tRNA degradation factors
RZR91_03410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
WOE70624
LinkDB
All DBs
Position
679786..681990
Genome browser
AA seq
734 aa
AA seq
DB search
MTCRFEFEMNNRSITVETGKVARQANGAVLLKSGNTVLLATAVMDEKPVEEHFLPLTVQY
IEKSYAAGKIPGGFVKRETKPSDFETLTSRLIDRSLRPLFPKGFFYPVQITVMLLSVDDG
ADLQSLALDAASAALYISDIPVKKCVAGVRIGRKDGEFILNPTLDELEDGSLDLFVSGTK
EDLLMIEMRSIGTVEVELEPSVTVDPMIDPMMAEQVIQFPRVNELNEEELVEAISLAQNA
ISLAAGEYEKAFAEAVKPKKDVELFDEVANPSIMTYIQEFYMDDINRALDGMAKSERGGE
LKAIVAKVMSDDVAVKEEWSEEEVKCAVDAVKRARVRSMILEEGRRADGRGLKDVRPISI
ETNILPSVHGSCLFTRGETQALVTCTLGNRQDAQMFERITGKSASYEEFMVHYNFPGFSV
GEASRIGPPGRRELGHGNLAKRAIEPSLDKTELDAIVRLVSEILESNGSSSMATVCGGSL
ALKAADVPVQKLIAGVAMGLVTEDDKYAILTDIMGLEDHDGDMDFKVAGSKDGITALQMD
IKLGGISLTLLREALEQAREARLHILEIMEKAAAEIEVNESILPSTEIFHVEPHKIVDII
GQAGKTIREIIEMFEVSIDLDKKEGEVKVSGPSKAKVKAACDHIKGIVQNGGAKKEIPQF
ELDKPIVGKVKKLVDFGAFIELPGDIDGLLHISKISRGRIDHPSDLLSEGQEVEVVVKSQ
KGHKIELALAKPLD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgacatgtagatttgaatttgagatgaataatcgttccataacagttgaaacaggtaaa
gttgcccgtcaagctaatggagcagttttgctaaaaagtggcaatacagttttgttggca
acggcagttatggatgaaaaacctgtagaagagcattttttgcctctaactgttcaatat
atagagaaaagttatgcagcaggtaaaattcctggaggttttgtaaaacgtgagacaaaa
ccaagcgattttgagactttaacatcacgacttattgaccgttctttaagaccacttttc
ccaaaaggctttttttatccggtacaaataacagtaatgcttttaagtgttgatgatggt
gcagatttacagtcattggcacttgatgcagcatcagcagctctttacatttctgatatt
cctgtcaagaagtgtgtagctggtgttcgaataggaagaaaagatggagagtttatctta
aatcctactctagatgagcttgaagatggatcattggacctttttgtttcaggaacaaaa
gaagatcttttaatgattgagatgcgctcaattggtacagtagaagttgagcttgagcca
tctgtaactgttgatccaatgattgatcctatgatggcagagcaggttattcagttccca
agagttaatgaactgaatgaagaggagctggttgaagcaatttctctagcccaaaacgca
atcagcctggcagctggtgagtacgagaaagcatttgctgaagcagtaaaaccaaaaaaa
gatgtagaactgtttgatgaagtagccaatccttcgattatgacttatattcaggaattt
tacatggatgacatcaatcgtgctttagatggaatggcaaaaagcgagcgtggtggtgaa
ctaaaagcaatagttgcaaaagtaatgagtgatgatgttgctgtaaaagaggagtggagt
gaagaagaggtaaagtgtgctgttgatgcggttaaacgtgcaagagttagatcaatgatt
cttgaagagggtcgtcgtgctgatggaagagggctaaaagatgtaagacctataagcata
gagacaaatatcttgcctagcgttcacggatcatgcctctttaccagaggtgagacacag
gctttggttacgtgtactttgggaaatcgccaagatgcacagatgtttgaaagaattact
ggtaaaagtgctagttatgaagagtttatggttcactataactttccgggatttagcgtt
ggggaagcttctcgcataggacctccaggtcgtcgtgaattaggacacggaaaccttgca
aaacgtgcaattgagccaagccttgataaaacagagttggatgcaattgtacgtttagtc
tcagaaattttagagtctaatggttcatcttctatggcaactgtttgtggtggctcatta
gctcttaaagctgctgatgtaccggttcaaaaactgatagctggagttgctatggggctt
gttacagaggatgacaaatatgccattttaacagatatcatgggattggaagatcatgat
ggtgatatggactttaaagttgccggtagcaaagatggtattacagcccttcaaatggat
attaaactaggtggtattagtttaactcttttaagagaggctcttgaacaggctcgtgag
gcaagattgcatattcttgaaattatggaaaaagcagctgctgagattgaggttaatgag
tctattttgccaagtacagaaattttccatgtagagcctcataaaatagtagatattatt
ggtcaggctggaaaaacaattcgtgaaattatcgaaatgtttgaagtaagcatagacctt
gacaaaaaagagggtgaggttaaagtttcaggccctagcaaagctaaagtgaaagctgct
tgcgatcatattaaaggtatcgttcaaaacggtggagcaaaaaaagagattccacagttt
gaacttgataaacctattgttggaaaagtgaaaaaactagttgattttggggcgtttatt
gagttgcctggagatattgacggtctattgcatatttctaaaatttcaagaggacgcatt
gatcacccaagtgacttgttgagtgaaggtcaagaggttgaagttgtagtaaaatcacaa
aagggtcataagatagagttggcacttgccaagcctttggattaa
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