Hydrogenimonas thermophila: RZR91_03725
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Entry
RZR91_03725 CDS
T09456
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
htm
Hydrogenimonas thermophila
Pathway
htm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RZR91_03725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htm03019
]
RZR91_03725
03009 Ribosome biogenesis [BR:
htm03009
]
RZR91_03725
Enzymes [BR:
htm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RZR91_03725
Messenger RNA biogenesis [BR:
htm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RZR91_03725
Ribosome biogenesis [BR:
htm03009
]
Prokaryotic type
rRNA helicases
RZR91_03725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WOE70686
LinkDB
All DBs
Position
740256..741731
Genome browser
AA seq
491 aa
AA seq
DB search
MEQEIIEQSKLEEQPSVSFSDFGFKQPIMRAIDRMGFKVPSPIQEKVIPLILEGHDVVGQ
AHTGTGKTAAFGLPALNNIEWRNGVDLLVITPTRELATQVSDELFSLGRFAGIRTVSVYG
GQSYRRQLDLISRGAQVVVATPGRLLDMLSSGKLEDFNPSIVVLDEADEMLDMGFLDDIK
EIFSYLPQQRQTLLFSATMPEPIKDLARHILHEPKFVSVTKKETTNKDIRQLYYVIEEKD
RDDAIVRLLDKEEPEKSIVFCRMKREVDRVVELLQAQGVNARGLHGDMEMRERMEVIKGF
RGRDIDVLVATDVAARGLNIENVSHVFNYHIPFDPESYVHRIGRTGRAGKKGTAITLVTP
LEFKELEHIRQKVGTKMEYGFVDEGGDSAEDLAERFLESVRAQDLNEEAVKIYEVLENEM
SPQKVAYKLISLILDNGLISQKSKGIGFSQEEVERLMEISGMAEKSKKSGNRKRRSSGRN
SRNRSSGGRRY
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagagataattgaacagagtaaactagaagagcaaccttcagtaagtttttcc
gattttggatttaaacagcctattatgcgtgctattgatcgaatggggtttaaagtacct
agtccaattcaggagaaggtgatccctttgattttggaagggcatgatgttgttgggcag
gctcacacggggactggtaagacagcagcatttggattgcctgcattaaataacatagag
tggcgaaatggagttgatttgttagtcataactcctactcgtgagttagcaacacaggta
agcgatgagcttttcagtcttggacgttttgcaggtattcgtacagttagtgtttatggt
gggcagagttatcgcagacagcttgatctcattagccgtggagcacaagttgttgtagca
acaccgggacgtttgttagatatgctgagttctgggaaacttgaggatttcaatccatct
attgttgttttggatgaagcagatgagatgcttgatatgggctttttggatgatattaaa
gagattttcagttatcttccacaacagcgtcaaacgcttcttttttcagctacaatgcct
gaacctattaaagatttggctcgtcacattcttcatgagccaaagtttgtttcagttact
aaaaaagagacaacaaataaagatattcgccaactctactacgttatagaagagaaagac
agagatgatgcaattgtacggcttttagataaagaggagccggaaaaatctatagtattt
tgtcgtatgaaacgtgaagttgaccgtgttgttgagcttttgcaagcacaaggtgttaat
gccagaggtcttcacggcgatatggagatgcgtgagcgcatggaggtaatcaaaggattt
agaggtagagatatagatgtacttgttgctaccgatgttgcggcaagagggcttaacata
gagaatgtaagtcacgtatttaactaccatattccatttgatcctgagagttatgttcac
cgcattggtcgtacagggcgtgccggcaagaaaggtacagccattacacttgttacacca
ttggagtttaaagagttagagcatattcgtcaaaaagttggtaccaaaatggagtatggc
tttgttgatgaaggtggtgattcggctgaagatcttgctgaacgctttttagagagtgtg
cgtgctcaggatcttaacgaagaggctgttaaaatttatgaagttcttgaaaatgagatg
tcaccgcaaaaagtagcttataagcttatctctttaattcttgacaatggacttatctct
caaaagagtaaaggtattgggtttagtcaagaagaggttgagagattgatggagataagc
ggtatggctgaaaaatctaaaaagagtggaaaccgcaaacgccgcagtagtggaagaaac
agtcgtaacagaagtagtggtggtcgtcgatattaa
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