Hydrogenimonas thermophila: RZR91_05960
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Entry
RZR91_05960 CDS
T09456
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
htm
Hydrogenimonas thermophila
Pathway
htm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
htm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RZR91_05960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htm03400
]
RZR91_05960
Enzymes [BR:
htm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RZR91_05960
DNA repair and recombination proteins [BR:
htm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RZR91_05960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
HHH_RecD2
AAA_19
UvrD_C_2
SH3_13
Viral_helicase1
OB_YrrC
HHH_5
PIF1
AAA_22
AAA_5
AAA
Mg_chelatase
NB-ARC
UvrD_C
PhoH
AAA_12
ABC_tran
nSTAND3
AAA_24
AAA_14
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WOE71116
LinkDB
All DBs
Position
1192783..1195035
Genome browser
AA seq
750 aa
AA seq
DB search
MKLSGKIDQILFQKEGFLIAKLEGGAKISGSCLISDIDALEGQEVELEGEWGEHPRFGPQ
FVFDELQIKGSELYFYLTKVVKGVGQKLVKRLISHYGEEELLRILDEEPQKLLEFKGIKE
KKLSQITQSWQRYKEMRELAMFLAPYKIGQSIIVEIYQTFIGKDNLIEAIKENPYIITQV
KGVGFKRADEMAQSMGIDPKSPFRIEAAINYLLREISEQQGSSATDKKEFIEKLEDELGL
DGETLLIENVINKLIEREVLYVIDGYLAHTFYYKAERGIFEFFKEKLEKRDGKLKQDIDK
FIQEQEENIGFTLGEEQREAVKLLNSGVKVMALVGYAGTGKSTSAKMMLKLLEESFCYDA
IIATALSGIASQRIHDTTGYKSMTIQSLLVAHKEQDEFPYDVVLLDEASMVNSQIFYQLI
SKLKDDAIFLIIGDDGQLPPIGAGNVLSDIIKYELIPVIKLTKIYRQSEEQAITLIADSI
RRAELPEYQKEYLDFKFIDKSIANYYAIRNGMSEDERRELRDSINQQILEAIKSESVSYI
LEAREKLKSKDIKGYLTHLQVITPMRGGLLGVENMNQQLQKLFNPNAKYAIKRGLYSYGL
YDKVVHIKNENMPSYTPEGFKNGDDATESRIFNGMIGLIFKIDKEEEECFVYYPNEQIVV
RYGFDLISDYLQLAYALTIHKTQGMEYETVIIPISFSHYIMHNTKLLYTAVTRAKKMCII
IGEDAAFKGACRRIDTTERTTVLGLLANSI
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactaagcggaaagattgatcagattctttttcaaaaagagggctttttaattgca
aaattagagggtggtgccaaaatttcaggcagttgcctcatttcagatattgatgctttg
gaaggtcaagaggttgaactagagggtgaatggggagaacacccaaggtttggtcctcaa
tttgtttttgatgaattgcaaataaaagggagtgaactctacttctatcttacaaaagtg
gtcaaaggggtaggacaaaaactggttaagcgtcttatatctcattatggcgaagaggaa
ctattacgtattttagatgaagagccgcaaaaactgttggagttcaaagggataaaagag
aagaagctctctcaaattacccagagttggcagcggtataaagagatgcgtgagctggca
atgtttttggctccttataaaataggtcaatccataatagttgaaatatatcaaacattt
ataggtaaagataatttaatagaagcaataaaagagaatccttacatcattacgcaagtt
aaaggtgtaggtttcaagcgtgccgatgagatggcacaatcgatgggaatagatccaaaa
tctccatttcgcatagaagcggcgattaactaccttttacgtgaaatcagtgaacagcaa
ggctctagtgcaacagataaaaaagagtttatagaaaagttagaagacgagcttggttta
gatggtgaaacacttttaattgaaaatgttattaacaaattaattgaacgtgaagtgtta
tatgtaatagatggatatttagcacacaccttttactacaaagcagagagaggaatcttt
gagtttttcaaggaaaagcttgaaaaaagagatggaaaattaaagcaagatatagacaaa
tttatacaagagcaagaagaaaacataggttttacactaggagaagagcagcgtgaagcg
gtaaaacttctaaacagcggtgtaaaagttatggcacttgtaggttacgcaggaacagga
aagagtacaagtgcaaagatgatgctaaagcttcttgaagagagtttttgttatgacgct
attattgccactgctcttagcggcatagcttcacaacgcatacacgatacaaccggctac
aaatctatgacaatccagagtcttcttgtggcacacaaagagcaagatgagtttccctat
gatgttgtactgctagatgaagcatctatggtaaattcgcaaatattttaccagcttatt
tccaaactcaaagatgatgcaatatttcttattatcggtgatgatggtcagttaccgcct
attggagcaggcaatgttctttctgatattattaaatatgaacttattccagttattaaa
ctgactaaaatctaccgtcaaagtgaagagcaggctataacgctaattgctgattcgata
agacgagctgaacttccagaataccaaaaagagtatttagactttaaatttatagataag
agtattgctaactattatgccatacgtaatggaatgtcagaagatgaaagaagagagctt
agagatagtataaatcagcaaattttagaagctatcaagagtgagtctgtctcttatatt
cttgaagcacgagagaagttgaagtctaaagatattaaagggtatttaacccatttgcaa
gtgattactccgatgcgtggaggtctgctaggtgttgaaaatatgaatcagcaactgcaa
aaactcttcaatccaaatgcaaaatatgctatcaaacggggactttatagttatggactt
tatgacaaagtagtgcatataaaaaatgagaatatgccatcttacacaccagaaggcttt
aaaaatggagatgacgcaacagagagccgaatctttaatggaatgattgggctgattttt
aaaatagataaagaagaggaagagtgctttgtatattacccaaacgaacaaatagttgtt
aggtatggatttgatctaatatcagactatttacagcttgcttatgctctgacaatccac
aaaacccagggaatggagtatgagactgtcatcatacctataagcttcagccactacatt
atgcataacacaaaactgctatatactgctgtaacacgagccaaaaagatgtgcataatc
attggagaagatgccgccttcaaaggagcttgtaggcgtattgatacaacagagcgaacg
acggtgctggggttgttggcgaactcaatttaa
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